DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and Olig3

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001099739.1 Gene:Olig3 / 293012 RGDID:1305997 Length:273 Species:Rattus norvegicus


Alignment Length:149 Identity:45/149 - (30%)
Similarity:68/149 - (45%) Gaps:24/149 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LSLWQRSQVTPLVPQRPSTNGRANGSSSSSKKTRRRVAS---MAQRRAANIRERRRMFNLNEAFD 107
            :|..|...|..:..:..|..|......||..|.:::::.   ...|...|.|||:||.:||.|.|
  Rat    41 VSSTQGDMVQKMPGESLSRAGAKAAGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMD 105

  Fly   108 KLRRKVPTFAY---EKRLSRIETLRLAITYIGFMAELLSGTPSNSHKSRSDVYGSMNGHHQA--- 166
            .||..:| :|:   .::||:|.||.||..||    .:|:.:.....:...::||   |||.|   
  Rat   106 GLREVMP-YAHGPSVRKLSKIATLLLARNYI----LMLTSSLEEMKRLVGEIYG---GHHSAFHC 162

  Fly   167 ---PPPAIHPHH----LHP 178
               ...|.||.|    :||
  Rat   163 GTVGHSAGHPAHAANAVHP 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 24/68 (35%)
Olig3NP_001099739.1 bHLH_TS_OLIG3 70..150 CDD:381511 26/84 (31%)

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