DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer3 and Nhlh1

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001099440.1 Gene:Nhlh1 / 289230 RGDID:1310261 Length:133 Species:Rattus norvegicus


Alignment Length:70 Identity:31/70 - (44%)
Similarity:44/70 - (62%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGF 137
            |..::.|||.|:...|.|...|||.|:...|.||.:||:.:||...:|:||:||.|||||.||.:
  Rat    62 SREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISY 126

  Fly   138 MAELL 142
            :..:|
  Rat   127 LNHVL 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 29/62 (47%)
Nhlh1NP_001099440.1 bHLH_TS_HEN1 61..132 CDD:381544 31/70 (44%)

Return to query results.
Submit another query.