DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and lin-32

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_508410.2 Gene:lin-32 / 191703 WormBaseID:WBGene00003018 Length:142 Species:Caenorhabditis elegans


Alignment Length:120 Identity:43/120 - (35%)
Similarity:63/120 - (52%) Gaps:17/120 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QRSQVTPLVPQRPS--------TNGRANGSSSSSKKTRRRVASMA------QRRAANIRERRRMF 100
            |.:..|||  |.|:        .:..:||.....||..||..:.:      :|.|||.||||||.
 Worm    24 QSTMTTPL--QSPNFSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLRMRRSAANERERRRMN 86

  Fly   101 NLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSGTPSNSH-KSRS 154
            .||.|:|:||..:|.....|:||:.|||::|..||..::::|.....|.: ||:|
 Worm    87 TLNVAYDELREVLPEIDSGKKLSKFETLQMAQKYIECLSQILKQDSKNENLKSKS 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 24/47 (51%)
lin-32NP_508410.2 HLH 73..124 CDD:278439 26/50 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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