Protein Alignment Fer3 and hlh-3

DIOPT Version :10

• Sequence 1: NP_524322.1
• Gene: Fer3 / 41411
• FlyBaseID: FBgn0037937
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_495938.4
• Gene: hlh-3 / 174447
• WormBaseID: WBGene00001950
• Length: 170
• Species: Caenorhabditis elegans
• Alignment Length: 156
• Identity: 50/156 - (32%)
• Similarity: 77/156 - (49%)
• Gaps: 30/156 - (19%)

  Fly    54 VTPLVPQRPSTNGRANGSSSSS--KKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTF 116
            :|......|||:.:...||.||  |:|:       |:|  |.|||:|:..:|:.|..|:.:||..
 Worm     1 MTASTSSTPSTSTKIPSSSKSSVTKQTK-------QKR--NERERKRVDQVNQGFVLLQERVPKA 56

  Fly   117 AYEK-RLSRIETLRLAITYIGFMAELLSGTPSNSHKS---------RSDVYG----SMNGHHQAP 167
            |..| :||::||||.|..||..:.:.|..:.::.|.|         :|.||.    ||..  |.|
 Worm    57 AGNKAKLSKVETLREAARYIQELQKQLGMSSTSFHNSMPADFPTPEQSPVYPQSVCSMMA--QTP 119

  Fly   168 PPA-IHPHHLHP--AAAYQRDFASPY 190
            .|: ..|::..|  .::.|.|.:|.|
 Worm   120 SPSYTSPYYPPPQMMSSNQHDMSSHY 145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Fer3	NP_524322.1	bHLH_TS_FERD3L_NATO3	79..142	CDD:381421	23/63 (37%)
hlh-3	NP_495938.4	bHLH_TS_ASCL	28..83	CDD:381424	23/63 (37%)
		COG3416	<47..>136	CDD:442642	27/90 (30%)