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Protein Alignment Fer3 and hlh-3
DIOPT Version :9
Sequence 1: | NP_524322.1 |
Gene: | Fer3 / 41411 |
FlyBaseID: | FBgn0037937 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_495938.4 |
Gene: | hlh-3 / 174447 |
WormBaseID: | WBGene00001950 |
Length: | 170 |
Species: | Caenorhabditis elegans |
Alignment Length: | 156 |
Identity: | 50/156 - (32%) |
Similarity: | 77/156 - (49%) |
Gaps: | 30/156 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 VTPLVPQRPSTNGRANGSSSSS--KKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTF 116
:|......|||:.:...||.|| |:|: |:| |.|||:|:..:|:.|..|:.:||..
Worm 1 MTASTSSTPSTSTKIPSSSKSSVTKQTK-------QKR--NERERKRVDQVNQGFVLLQERVPKA 56
Fly 117 AYEK-RLSRIETLRLAITYIGFMAELLSGTPSNSHKS---------RSDVYG----SMNGHHQAP 167
|..| :||::||||.|..||..:.:.|..:.::.|.| :|.||. ||.. |.|
Worm 57 AGNKAKLSKVETLREAARYIQELQKQLGMSSTSFHNSMPADFPTPEQSPVYPQSVCSMMA--QTP 119
Fly 168 PPA-IHPHHLHP--AAAYQRDFASPY 190
.|: ..|::..| .::.|.|.:|.|
Worm 120 SPSYTSPYYPPPQMMSSNQHDMSSHY 145
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer3 | NP_524322.1 |
HLH |
87..135 |
CDD:278439 |
21/48 (44%) |
hlh-3 | NP_495938.4 |
HLH |
32..83 |
CDD:197674 |
21/50 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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