DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and Mesp2

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_032615.2 Gene:Mesp2 / 17293 MGIID:1096325 Length:370 Species:Mus musculus


Alignment Length:241 Identity:61/241 - (25%)
Similarity:88/241 - (36%) Gaps:82/241 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EAPPPPIVPYQELIAGFPCTDLSLWQRSQVTPLVPQRPSTNGRANGSSSSS-------------- 75
            ::|||     |.|      ..|..|..||......|..||:..::..||.|              
Mouse     3 QSPPP-----QSL------QGLDHWVFSQGWGWAQQSDSTSPASSSDSSGSCPCYATRRPSQPAG 56

  Fly    76 --KKTR----------RRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYE--KRLSRIE 126
              :.||          |...:..||::|:.||:.||..|..|..:|||.:|.....  :.|::||
Mouse    57 PARSTRTTQATAPRRTRPAPAGGQRQSASEREKLRMRTLARALQELRRFLPPSVAPAGQSLTKIE 121

  Fly   127 TLRLAITYIGFMAELL-------------SGTPSNSHK----------SRSDVYGSMNGHHQA-- 166
            ||||||.|||.::.||             |...:.||:          |::.:.|...|...:  
Mouse   122 TLRLAIRYIGHLSALLGLSEDSLRRRRRRSADAAFSHRCPQCPDGGSPSQAQMLGPSLGSAMSSG 186

  Fly   167 ---------PPPAIHPHHLHPAAA---------YQRDFASPYNHSL 194
                     |.|.|.|.:|....:         |.....||.:.||
Mouse   187 VSWGCPPACPGPLISPENLGNRISNVDPWVTPPYCPQIQSPLHQSL 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 22/49 (45%)
Mesp2NP_032615.2 HLH 80..133 CDD:278439 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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