DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and Lyl1

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_032561.2 Gene:Lyl1 / 17095 MGIID:96891 Length:278 Species:Mus musculus


Alignment Length:176 Identity:50/176 - (28%)
Similarity:71/176 - (40%) Gaps:54/176 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HPHPIDQPTYM-PDVPFQPLWGQEAPPPPIVPYQELIAGFPCTDLSLWQRSQVTPLVPQRPSTNG 66
            ||||.....|: |..||                            |::..|:    :.:|||.:.
Mouse   104 HPHPFLNSVYIGPAGPF----------------------------SIFPNSR----LKRRPSHSE 136

  Fly    67 RANGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLA 131
            .........:|..|||.:       |.|||.|..::|.||.:||:.:||...:::||:.|.||||
Mouse   137 LDLADGHQPQKVARRVFT-------NSRERWRQQHVNGAFAELRKLLPTHPPDRKLSKNEVLRLA 194

  Fly   132 ITYIGFMAELL-----------SGTPSNSHKSRSDVYGSMN---GH 163
            :.||||:..||           |...|....:|..|.||..   ||
Mouse   195 MKYIGFLVRLLRDQTAVLTSGPSAPGSRKPPARRGVEGSARFGAGH 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 19/47 (40%)
Lyl1NP_032561.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
bHLH_TS_LYL1 145..209 CDD:381548 29/70 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..278 8/29 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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