DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and HLH54F

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_308637.5 Gene:HLH54F / 1269982 VectorBaseID:AGAMI1_011263 Length:310 Species:Anopheles gambiae


Alignment Length:124 Identity:41/124 - (33%)
Similarity:58/124 - (46%) Gaps:33/124 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSGTPSNSHK 151
            ||.|||.|||.||..|::||..|:|.:|....:.:||:::|||||..||.::|..|.|      :
Mosquito    35 QRNAANARERARMRVLSKAFFNLKRNIPWVPADTKLSKLDTLRLAKNYITYLAATLDG------Q 93

  Fly   152 SRSDVYGSMNGHHQAPPP---------AIHPHHLH----------PAAAYQRDFASPYN 191
            |..|...::     |.||         .:.||...          .|||:.   |:|.|
Mosquito    94 SVEDFSTNL-----AQPPKTAWPFIFQQVQPHETSKSSKHGTQSTTAAAFT---ATPPN 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 26/54 (48%)
HLH54FXP_308637.5 None

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