DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and LOC110440056

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_021334761.1 Gene:LOC110440056 / 110440056 -ID:- Length:207 Species:Danio rerio


Alignment Length:156 Identity:62/156 - (39%)
Similarity:80/156 - (51%) Gaps:27/156 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WGQEAPPPPIVPYQELIAGFPC----TDLSLWQ---------RSQV--TPLVPQRPSTNGRANGS 71
            |||..|..|.:..|.....|.|    ..||.|.         .:|:  |.|..|.|.....|...
Zfish    20 WGQMDPSFPQIHSQLDTLLFDCGAMAGQLSPWSSYGCQSVFPEAQLTFTDLDSQSPQLEVGAEVD 84

  Fly    72 SS-------SSKKTRRRVAS----MAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRI 125
            ||       .:::.:|.:|:    ..||.|||||||:||.::|.||::||..||||.||||||:|
Zfish    85 SSLLDEPHEMTQQQQRCLATHHPYKVQRHAANIRERKRMLSINSAFEELRCHVPTFPYEKRLSKI 149

  Fly   126 ETLRLAITYIGFMAE-LLSGTPSNSH 150
            :||||||.||..:.| ||||....|:
Zfish   150 DTLRLAIAYIALLREILLSGCDPKSY 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 38/67 (57%)
LOC110440056XP_021334761.1 bHLH_TS_ceHLH13_like 107..169 CDD:381422 38/61 (62%)

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