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Protein Alignment Fer3 and atoh1c
DIOPT Version :9
Sequence 1: | NP_524322.1 |
Gene: | Fer3 / 41411 |
FlyBaseID: | FBgn0037937 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_003199618.1 |
Gene: | atoh1c / 100498672 |
ZFINID: | ZDB-GENE-090805-1 |
Length: | 204 |
Species: | Danio rerio |
Alignment Length: | 149 |
Identity: | 51/149 - (34%) |
Similarity: | 72/149 - (48%) |
Gaps: | 33/149 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 PHPIDQPTYMPDVPF-QPLW-------GQEAPPPPIVPYQELIAGFPCTDLSLWQRSQVTP--LV 58
|| ||.|| |.:| .::.|..|:...:| .|..|:...| ||
Zfish 2 PH--------PDTPFGQFIWRETDRSHSEQCPKAPMGWREE----------QLQDRASCDPCALV 48
Fly 59 PQRPSTNGRANGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLS 123
..|.:....::...||..:.||| :|.|||.||||||..||.|||:||..:|....:::||
Zfish 49 QLRLTGLSYSSEEQSSIARARRR-----RRLAANARERRRMLGLNVAFDRLRSVIPNVESDRKLS 108
Fly 124 RIETLRLAITYIGFMAELL 142
:.|||::|..||..::|||
Zfish 109 KSETLQMAQIYISTLSELL 127
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer3 | NP_524322.1 |
HLH |
87..135 |
CDD:278439 |
24/47 (51%) |
atoh1c | XP_003199618.1 |
HLH |
87..129 |
CDD:197674 |
19/41 (46%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.870 |
|
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