DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and atoh8

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_002937330.2 Gene:atoh8 / 100490889 XenbaseID:XB-GENE-877027 Length:246 Species:Xenopus tropicalis


Alignment Length:203 Identity:41/203 - (20%)
Similarity:75/203 - (36%) Gaps:52/203 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 TEYLAKN-GSSINQYKLYQI-------YQCHL---------MLTLINWALGAGVYVVV------A 123
            ||:|.:| |..|....::::       |.|:.         .:.|...|:|...::.|      .
 Frog    89 TEFLKQNIGRGIGALTIHKVQLSDQGLYTCYFESETNHNQAQVELKVAAMGLHPFIWVEDYHDGK 153

  Fly   124 LSLERYISIVFPMHFRTWNSPQ----RATRAIVIAFLIPAIFYVPYAI-----TRYKGKQRFDLL 179
            ::|....|..||.....|....    .:|..|.:. ....:|:|..||     .:.....|.|||
 Frog   154 ITLNCESSGWFPKPMAMWQDETGTRLESTEKINVT-EETGLFHVTSAIRIETQAKISCHVRNDLL 217

  Fly   180 QNVTIYSMDDHPIYTTFYWQIYKWTREAILRFLPIIILTVLNIQIMI-----------AFRKRQK 233
            ::....|:   ....:|||::   .|..|.||  :::.:.|.:.:::           ..|..|.
 Frog   218 EDGKESSI---KFAESFYWRV---DRSGISRF--VLMASCLAVALIVIGVTPRVVRMWRIRTLQD 274

  Fly   234 MFQQLTNK 241
            ...:|:||
 Frog   275 DMGKLSNK 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 16/82 (20%)
atoh8XP_002937330.2 bHLH_TS_ATOH8 149..216 CDD:381427 12/67 (18%)

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