DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and LOC100489188

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_017953149.1 Gene:LOC100489188 / 100489188 XenbaseID:XB-GENE-29079611 Length:170 Species:Xenopus tropicalis


Alignment Length:175 Identity:60/175 - (34%)
Similarity:88/175 - (50%) Gaps:36/175 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MPDVPFQPLWGQEAPPPPIVPYQELIAGF-------PCT---------DLSLWQR-SQVTPLVPQ 60
            |.|:    ||.   |.|....:.:|.:.|       .||         .:..|.. |||...||.
 Frog     1 MEDI----LWD---PEPDYQLWDQLESTFQLHSEPESCTMDFFPAVTEHVPAWPALSQVVSEVPL 58

  Fly    61 RPSTNGRANGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRI 125
            :.:..| |..:||..:::.........|:||||||||||.::|.||::||.:||||.||||||:|
 Frog    59 QLAGLG-AEMNSSFQEESLMEGPCKVHRQAANIRERRRMLSINSAFEELRGRVPTFPYEKRLSKI 122

  Fly   126 ETLRLAITYIGFMAELLSG-----------TPSNSHKSRSDVYGS 159
            :||||||.||..::::||.           ..:.|...:||::.:
 Frog   123 DTLRLAIAYIALLSDILSSGMDPKTYVEEFVRTGSRGPQSDIWNT 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 35/62 (56%)
LOC100489188XP_017953149.1 bHLH_TS_ceHLH13_like 80..142 CDD:381422 37/61 (61%)

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