DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and lyl1

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_009300341.1 Gene:lyl1 / 100333113 ZFINID:ZDB-GENE-090807-1 Length:326 Species:Danio rerio


Alignment Length:217 Identity:61/217 - (28%)
Similarity:83/217 - (38%) Gaps:66/217 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PDVPFQPLWG--QEAPPPPIVPYQELIAGFPCTDLSLWQRSQVTPLVP----------------- 59
            |.:|..||..  ..|||||..|.:..:|...|    |...|....|:|                 
Zfish   106 PPLPPLPLLAALHPAPPPPHGPAELRLAQLSC----LTGSSPAAALLPPAFLQTHPFISSSFLMP 166

  Fly    60 -------------QRPSTNGRAN-GSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLR 110
                         :||||:.... .|....:|..|||.:       |.|||.|..|:|.||.:||
Zfish   167 PAGFGIFSNARMKRRPSTHFEVEIRSDGPPQKLARRVFT-------NSRERWRQQNVNGAFSELR 224

  Fly   111 RKVPTFAYEKRLSRIETLRLAITYIGFMAELLSG--------------TPSN------SHKSRSD 155
            :.:||...:::||:.|.||||:.||.|:.:||:.              |||.      :..|.|.
Zfish   225 KLIPTHPPDRKLSKNEILRLAMKYIDFLEQLLNDQSQPEETGQRAHAHTPSTHSLLLLTASSGSS 289

  Fly   156 VYGSMNGHHQAPPPA--IHPHH 175
            .||..:......|.|  ..|.|
Zfish   290 CYGDTDSEESTGPRACSTDPKH 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 20/47 (43%)
lyl1XP_009300341.1 HLH 206..256 CDD:197674 23/49 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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