DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and neurod1

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001090868.1 Gene:neurod1 / 100038290 XenbaseID:XB-GENE-963757 Length:361 Species:Xenopus tropicalis


Alignment Length:104 Identity:21/104 - (20%)
Similarity:38/104 - (36%) Gaps:28/104 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 ANRDRLRSFVRRTQ-SVIQKQGSVEH--------------TTNSKVWIMFKNKFQRDSLSHHSRK 382
            ||..:.:....|:| ..:::.|..::              ||||....:       :|.::|||.
 Frog   304 ANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDPFL-------NSGTYHSRD 361

  Fly   383 FSRHMPIEQD------TVDIQLASGEQSTSGEMCEADTL 415
            .|....:...      |.|..|.|.::..:|:.....||
 Frog   362 ESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTL 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421
neurod1NP_001090868.1 bHLH_TS_NeuroD1 82..167 CDD:381562
Neuro_bHLH 167..289 CDD:463621
Blue background indicates that the domain is not in the aligned region.

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