DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and tcf23

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_001342593.4 Gene:tcf23 / 100002924 ZFINID:ZDB-GENE-090806-5 Length:277 Species:Danio rerio


Alignment Length:185 Identity:41/185 - (22%)
Similarity:66/185 - (35%) Gaps:67/185 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QPLWGQEAPPPPI-----------------------VPYQELIAG------------------FP 42
            :|.||..|..|.:                       :|::|...|                  .|
Zfish    41 RPFWGLHAHLPSLCSLGSEHPWEAEPEITQRLKIHTLPHREAEGGDEETHGLFCHLERRVQPAVP 105

  Fly    43 CTDLSL-----WQRSQ--------------VTPLVPQRPSTNGRANGSSSSSKKTRRRVASMAQR 88
            ..:.:|     |||.:              ...|..||.:.....:|.::||:      |..:|.
Zfish   106 MAERALDEDMAWQRGEDGGKSLRTQTWNQTCVKLATQREAKKWVKSGPTASSR------ACKSQT 164

  Fly    89 RAAN-IRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELL 142
            ...| .|||.|:.||.:||..|:..:|:...:.:||:::.|.||..||..:.|.|
Zfish   165 SPENAARERSRVRNLRQAFHSLQAALPSVPPDTKLSKLDVLVLATNYIAHLTETL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 17/48 (35%)
tcf23XP_001342593.4 HLH 170..221 CDD:197674 19/50 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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