DRSC/TRiP Functional Genomics Resources

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Protein Alignment MARS1 and GstD11

DIOPT Version :9

Sequence 1:NP_004981.2 Gene:MARS1 / 4141 HGNCID:6898 Length:900 Species:Homo sapiens
Sequence 2:NP_001138040.1 Gene:GstD11 / 41512 FlyBaseID:FBgn0038029 Length:243 Species:Drosophila melanogaster


Alignment Length:137 Identity:30/137 - (21%)
Similarity:55/137 - (40%) Gaps:44/137 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    33 VGPEDCVVPFLTRPKVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDD-----------LTNQWLE 86
            :.|:.|         ||.:. |.|..|:.:.||..|  |::.:.:.|           |.:|.|:
  Fly    70 MNPQHC---------VPTMN-DEGLVLWESRAILSY--LVAAYGKSDQLYPTDIRVRALVDQRLQ 122

Human    87 WEATELQPALSAALYYL--------VVQGKKGE--DVLGSVRRALTHIDHSLSRQNCPFLAGETE 141
            ::...|...|:.  ||.        :.:||:.:  :.:|.:...|.      .||   |.|.:..
  Fly   123 FDLGTLYMRLTD--YYFPTMFIGAPLDEGKRAKLAEAVGWLNTILE------GRQ---FSAADHF 176

Human   142 SLADIVL 148
            ::||:.|
  Fly   177 TIADLTL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MARS1NP_004981.2 Thioredoxin_like <27..68 CDD:294274 9/34 (26%)
GstA <47..189 CDD:223698 28/123 (23%)
GST_C_MetRS_N 77..179 CDD:198340 19/93 (20%)
PRK12268 264..819 CDD:237029
MetRS_core 265..633 CDD:173907
'HIGH' region 273..283
'KMSKS' region 593..597
Anticodon_Ia_Met 642..771 CDD:153411
MetRS_RNA 845..889 CDD:238475
GstD11NP_001138040.1 GST_N_Delta_Epsilon 25..98 CDD:239343 11/39 (28%)
GST_C_Delta_Epsilon 112..231 CDD:198287 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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