DRSC/TRiP Functional Genomics Resources

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Protein Alignment MARS1 and AIMP3

DIOPT Version :9

Sequence 1:NP_004981.2 Gene:MARS1 / 4141 HGNCID:6898 Length:900 Species:Homo sapiens
Sequence 2:NP_660194.1 Gene:AIMP3 / 246507 FlyBaseID:FBgn0050185 Length:179 Species:Drosophila melanogaster


Alignment Length:98 Identity:24/98 - (24%)
Similarity:43/98 - (43%) Gaps:18/98 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    83 QWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRALTHIDHSLSRQNCPFLAGETESLADIV 147
            ||:|:          :.||  |..|.|.:.|...:......:..|.|     :|.|...:|||:.
  Fly    73 QWIEF----------SVLY--VAPGSKDKYVSKQLLADFNKLFASKS-----YLVGHFITLADLA 120

Human   148 LWGALYPLLQDPAYLPEELSA-LHSWFQTLSTQ 179
            ::.|:|.|::..:.:.:|:.. |..||..|..:
  Fly   121 VYYAIYDLVKSLSPVDKEVYLNLSRWFDHLQNR 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MARS1NP_004981.2 Thioredoxin_like <27..68 CDD:294274
GstA <47..189 CDD:223698 24/98 (24%)
GST_C_MetRS_N 77..179 CDD:198340 24/96 (25%)
PRK12268 264..819 CDD:237029
MetRS_core 265..633 CDD:173907
'HIGH' region 273..283
'KMSKS' region 593..597
Anticodon_Ia_Met 642..771 CDD:153411
MetRS_RNA 845..889 CDD:238475
AIMP3NP_660194.1 GST_C_AIMP3 65..166 CDD:198338 24/98 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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