DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ho and HMX1

DIOPT Version :9

Sequence 1:NP_524321.1 Gene:Ho / 41407 FlyBaseID:FBgn0037933 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_013306.2 Gene:HMX1 / 850902 SGDID:S000004195 Length:317 Species:Saccharomyces cerevisiae


Alignment Length:306 Identity:57/306 - (18%)
Similarity:117/306 - (38%) Gaps:76/306 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSASEETIADSQVSENVEDVEFVDMAFTKELRKATKDVHNLTDVLVNAKIALALSDDEVWYDGLL 65
            |..|..||..|..     ||.    |....:...|:|.||..:..:..|:|:|:....::..|:|
Yeast     1 MEDSSNTIIPSPT-----DVG----ALANRINFQTRDAHNKINTFMGIKMAIAMRHGFIYRQGIL 56

  Fly    66 AFYELYKFFETHLPERLLP-------------------KEFHRTAAFERDFAYFYGSDWRK---- 107
            |:|.::...|..: :|||.                   ::|.|:....:|....|.:.::.    
Yeast    57 AYYYVFDAIEQEI-DRLLNDPVTEEELQTSTILKQFWLEDFRRSTQIYKDLKLLYSNTFKSTESL 120

  Fly   108 -----DYEIRPAVQKYLEHLEKIAAQNELLLFAYSYQMYMALMSGGQMLQKKRMIARKMWIFSKN 167
                 .::..|.:|:::.::.:...:....:.:|.:.:|:||.:||::::..  :.|::.:|...
Yeast   121 NEFLATFQKPPLLQQFINNIHENIHKEPCTILSYCHVLYLALFAGGKLIRSN--LYRRLGLFPNF 183

  Fly   168 DDEEQQKQADKEAELATARAADGSVDKDDLEARPMPAQVTICPPGCEATYFPEKISVLKAKLRRV 232
            :...|::...|.....|.         .||.                    |.:.:.||.:.:: 
Yeast   184 EKLSQKELVKKGTNFFTF---------SDLG--------------------PTEETRLKWEYKK- 218

  Fly   233 FNNHYGAFDDDLRAA----FIEESRNVFRLNIEVVRTIKGVNRANL 274
              |:..|...:|..|    .|..:..:|..|..:|..|..:||..|
Yeast   219 --NYELATRTELTEAQKLQIISVAEGIFDWNFNIVAEIGELNRREL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HoNP_524321.1 Heme_oxygenase 25..265 CDD:279470 46/271 (17%)
HMX1NP_013306.2 COG5398 45..289 CDD:227685 42/253 (17%)
kinked helix 149..176 CDD:350856 6/28 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346550
Domainoid 1 1.000 50 1.000 Domainoid score I2910
eggNOG 1 0.900 - - E1_COG5398
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 50 1.000 Inparanoid score I1838
Isobase 1 0.950 - 0 Normalized mean entropy S5532
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002659
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104451
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2150
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.630

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