DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and ZNF394

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_115540.2 Gene:ZNF394 / 84124 HGNCID:18832 Length:561 Species:Homo sapiens


Alignment Length:397 Identity:110/397 - (27%)
Similarity:163/397 - (41%) Gaps:104/397 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   547 IPLAETLIAATSRPNG-------AKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSP-- 602
            ||:.:.|..|  .|.|       .||.....|....|..|:.::...|.|||.       :||  
Human   206 IPMQQILEEA--EPQGQLQEAFQGKRPLFSKCGSTHEDRVEKQSGDPLPLKLE-------NSPEA 261

  Fly   603 ---HNYSITNESGFELQLEDSETEDEMQPGVGSRPVYIC------------ELCSVQCKRKFEMI 652
               ::.|..|::| .::.|||: .:|:|.......:.:|            |....:||:.|.|:
Human   262 EGLNSISDVNKNG-SIEGEDSK-NNELQNSARCSNLVLCQHIPKAERPTDSEEHGNKCKQSFHMV 324

  Fly   653 ----------------------QHQRTMHRFDKMPHECDDCIFKCVSKSI---MDHHRQGQCSST 692
                                  :.||.:|  ::.|::|.:|     .||.   .|..|..:..:.
Human   325 TWHVLKPHKSDSGDSFHHSSLFETQRQLH--EERPYKCGNC-----GKSFKQRSDLFRHQRIHTG 382

  Fly   693 EKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCD 757
            ||.:.|.:|...|.....|.:|                   |.|...||..|        |..|.
Human   383 EKPYGCQECGKSFSQSAALTKH-------------------QRTHTGEKPYT--------CLKCG 420

  Fly   758 RTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCE 822
            ..::..|.||.| :..|...        |.|.|..|| ||...:.|..|.|.|.||:|:||:.||
Human   421 ERFRQNSHLNRH-QSTHSRD--------KHFKCEECG-ETCHISNLFRHQRLHKGERPYKCEECE 475

  Fly   823 MAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDL 887
            .:|.:.|:|..|.|:||||||:.|:||||.|.:|..|.:|...|:|.||:||..|.:.:||:..|
Human   476 KSFKQRSDLFKHHRIHTGEKPYGCSVCGKRFNQSATLIKHQRIHTGEKPYKCLECGERFRQSTHL 540

  Fly   888 KLHLQQH 894
            ..|.:.|
Human   541 IRHQRIH 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368 8/54 (15%)
C2H2 Zn finger 668..690 CDD:275368 6/24 (25%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 8/19 (42%)
zf-H2C2_2 802..825 CDD:290200 11/22 (50%)
COG5048 814..>886 CDD:227381 34/71 (48%)
C2H2 Zn finger 818..838 CDD:275368 8/19 (42%)
zf-H2C2_2 830..855 CDD:290200 15/24 (63%)
C2H2 Zn finger 846..866 CDD:275368 9/19 (47%)
zf-H2C2_2 859..883 CDD:290200 9/23 (39%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368
ZNF394NP_115540.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
SCAN 60..170 CDD:128708
KRAB_A-box 155..214 CDD:322003 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..201
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..285 15/62 (24%)
C2H2 Zn finger 337..353 CDD:275368 2/15 (13%)
COG5048 356..>420 CDD:227381 20/95 (21%)
C2H2 Zn finger 360..380 CDD:275368 6/24 (25%)
C2H2 Zn finger 388..408 CDD:275368 6/38 (16%)
zf-C2H2 414..436 CDD:306579 7/30 (23%)
C2H2 Zn finger 416..436 CDD:275368 6/20 (30%)
C2H2 Zn finger 444..463 CDD:275368 8/19 (42%)
SFP1 <464..543 CDD:227516 37/78 (47%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..519 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.