DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and si:ch211-119o8.6

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001108212.1 Gene:si:ch211-119o8.6 / 556659 ZFINID:ZDB-GENE-070912-17 Length:735 Species:Danio rerio


Alignment Length:933 Identity:203/933 - (21%)
Similarity:338/933 - (36%) Gaps:286/933 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 CLCSGC-------TKKLMGAYCYVKQAMAANELLMKHLKNGAAPTSTDCLQEAPMELCAEQHVEV 113
            |||..|       .|.|....| :|:...:  :|:.||......:..:..|::..:.....::|.
Zfish    29 CLCKNCLQSYWELNKSLECPVC-LKETRCS--VLLHHLSISRFASEGEFSQDSNFKPLHVGNLES 90

  Fly   114 KLETEDEDCGENDVTITCSELP----EPDETD-----MESK-----KSVDPLTMIETVKLEMEPR 164
            :::.|     |..::...|.:|    |.|.|.     ||:|     .|:|.|....|::   :..
Zfish    91 EMQLE-----ETTISQVMSTIPRIKTEEDMTTIVQMLMETKYEPVETSIDDLIYTPTIE---DIS 147

  Fly   165 SVEKPAYDDPTSDFEDEDSLDNLPLYNRIQ------------------KWKTGRKSVYK--CHDC 209
            ||::    :|:::..:|:...:|.:::.:.                  ...|..:|:..  |..|
Zfish   148 SVKR----EPSNEVSNEEIHRDLMIHDTVPTSSSVLTEPNDSGEPPHLSTTTTCRSLRSNLCLKC 208

  Fly   210 PRSFKRFDFLKRHEMRVH---KPETRLYDCSLCIRKFSRSEALEAHLKIHRNSKRSANISEHKKA 271
            .:||:|...|:.|| :||   ||    :.||.|.:.:.....|..|.::|.              
Zfish   209 GKSFERKSDLRAHE-KVHSLQKP----HQCSTCGKSYVDRHELSMHERLHT-------------- 254

  Fly   272 KAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPDIVSLCGRPNMEPHELAELFYPDSKD 336
                       |.||.:|..|:.::.:.:.|:.||..|                           
Zfish   255 -----------GEKLFDCSYCKKKFVRESALKYHLRSH--------------------------- 281

  Fly   337 LSEEQLINLIRKDLAAGIYQRFYSITNQSGYEMDLDSSETDSDLDGDHDDQHKRRKKSRKATYSC 401
                                                                     :.:..:||
Zfish   282 ---------------------------------------------------------TGEKPFSC 289

  Fly   402 ELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPL 466
            ..|.:.|.|:..|..|.|.  .....||.|..|...|.:...:|.|..:  ...::.|.|.:|..
Zfish   290 SQCGKSFSRRSTLNTHLRL--HMGPLPHQCDHCGKLFNTAAAMRAHRAT--HTGERPFPCPQCDK 350

  Fly   467 RFRWKHNLKTHFREHRITNQTFECSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHD 531
            :|.:|..|:.|...| ..|:.|:||.|.:.|.:|:...|| .::| ::.:...|.:|...|.|..
Zfish   351 KFIFKAELEVHLDGH-AGNKPFKCSVCGKGFLRKQECNVH-QTIH-QDKRSFHCTYCDNSFKRLS 412

  Fly   532 YLVKHLKRHGLKE-HDIPLAETLIAATSRPN----------GAKRITCRMCNLHFERIVDLRAHI 585
            :|..|||.|..:. |.....|   .:...||          |.|..:|..|...|....|...|:
Zfish   413 HLTSHLKIHYPESPHKCTYCE---KSFKHPNSLKLHERLHTGEKPYSCEHCGKRFPSSGDRTRHL 474

  Fly   586 QLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPVYICELCSVQCKRKFE 650
            .:..::     :||..|                                         :|.|:|.
Zfish   475 AVHSEV-----KSYKCP-----------------------------------------KCDRRFR 493

  Fly   651 M---IQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEKKHACGKCSYKFMWPENLE 712
            .   :|..:.||..:: |..|..|.......:.:..|  ....:.|:.::|.:|...|.....|:
Zfish   494 FKNSLQSHQVMHTGER-PFHCKKCDRDFARLANLKAH--SVVHTEERSYSCSQCGQAFKCSSTLK 555

  Fly   713 QHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHING 777
            .|:::..||:                           ||.|..|.:|:.....|..| :|:|   
Zfish   556 SHMIIHSSKT---------------------------LLDCTTCGKTFTRHDTLKRH-QDIH--- 589

  Fly   778 DRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTG-EKPFKCDLCEMAFPRHSELASHRRM-HTG 840
                 ..||.:.|:.||....||:.|..||..|:| :|.:.||.||.:|...|.|..||:| |:.
Zfish   590 -----AGIKVYKCTDCGKCLSSASCLKLHMEGHSGNKKMYYCDECEKSFSSMSYLQKHRQMAHSD 649

  Fly   841 EKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTC 905
            ||||.|..||:.|....||..|.|.|||...|.||.|.|.:.:.:.|:.|::.|:.|.|:.|..|
Zfish   650 EKPFVCFECGESFNSDGKLVTHQLQHSGRMDHACTECGKKFARKETLRRHVKAHSEERPYQCSDC 714

  Fly   906 GERFIQSSTLEKHRLMRRHFDEV 928
            |:.|.:|..|::|:|:  |.:.|
Zfish   715 GKGFKRSDQLKQHKLI--HSERV 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 8/20 (40%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
C2H2 Zn finger 401..422 CDD:275368 7/20 (35%)
C2H2 Zn finger 431..447 CDD:275368 4/15 (27%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 7/20 (35%)
C2H2 Zn finger 520..540 CDD:275368 8/19 (42%)
C2H2 Zn finger 638..659 CDD:275368 4/23 (17%)
C2H2 Zn finger 668..690 CDD:275368 3/21 (14%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 8/19 (42%)
COG5048 814..>886 CDD:227381 32/72 (44%)
C2H2 Zn finger 818..838 CDD:275368 10/20 (50%)
C2H2 Zn finger 846..866 CDD:275368 8/19 (42%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 8/21 (38%)
si:ch211-119o8.6NP_001108212.1 RING_Ubox 9..50 CDD:473075 6/20 (30%)
C2H2 Zn finger 205..225 CDD:275370 8/20 (40%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
COG5048 257..676 CDD:227381 127/597 (21%)
C2H2 Zn finger 261..281 CDD:275368 5/19 (26%)
C2H2 Zn finger 289..309 CDD:275368 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 5/21 (24%)
C2H2 Zn finger 345..362 CDD:275368 5/16 (31%)
C2H2 Zn finger 373..393 CDD:275368 7/20 (35%)
C2H2 Zn finger 401..421 CDD:275368 8/19 (42%)
C2H2 Zn finger 429..449 CDD:275368 3/22 (14%)
C2H2 Zn finger 457..477 CDD:275368 5/19 (26%)
C2H2 Zn finger 485..505 CDD:275368 5/60 (8%)
C2H2 Zn finger 513..533 CDD:275368 3/21 (14%)
C2H2 Zn finger 541..561 CDD:275368 5/19 (26%)
C2H2 Zn finger 569..589 CDD:275368 6/20 (30%)
C2H2 Zn finger 597..614 CDD:275368 6/16 (38%)
C2H2 Zn finger 626..647 CDD:275368 10/20 (50%)
C2H2 Zn finger 655..675 CDD:275368 8/19 (42%)
C2H2 Zn finger 683..703 CDD:275368 6/19 (32%)
C2H2 Zn finger 711..731 CDD:275368 8/21 (38%)

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