DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and znf568

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001016087.1 Gene:znf568 / 548841 XenbaseID:XB-GENE-5723274 Length:497 Species:Xenopus tropicalis


Alignment Length:730 Identity:173/730 - (23%)
Similarity:239/730 - (32%) Gaps:271/730 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SVYKCHDCPRSFKRFDFLKRHEMRVH-------KPETRLYDCSLCIRKFSRSEALEAHLKIHRNS 259
            |..|...||...||  ||:::|:..|       ||    :.||.|.:.|:...:|:.||:||.  
 Frog    12 SAAKKFKCPECGKR--FLRKNELNTHWKFHTGEKP----FTCSECGKSFTLKASLQNHLRIHT-- 68

  Fly   260 KRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPDIVSLCGRPNMEPH 324
                                   |.|...|..|...::.|.|.|:|...|               
 Frog    69 -----------------------GEKPYTCTECGKSFSDIGDFRKHQRIH--------------- 95

  Fly   325 ELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFYSITNQSGYEMDLDSSETDSDLDGDHDDQHK 389
                                                                             
 Frog    96 ----------------------------------------------------------------- 95

  Fly   390 RRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRN 454
                :.:..|:|..|.:||.....|..||          ||                      ..
 Frog    96 ----TGEKPYACSECGKKFTTSGNLLQHQ----------HV----------------------HT 124

  Fly   455 AQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECSECKRVFDKKKSLTVHLLSVHAEESKLIP 519
            ..|.|.|.:|...|....:|..|.|.| ...:.|.|:||.:.|..|..|.:| .:.|..| |...
 Frog   125 GAKPFTCRECGKSFTCSSHLSIHVRTH-TGEKPFSCAECGKCFKVKSYLRIH-QTTHTGE-KPFT 186

  Fly   520 CQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAH 584
            |..|.:.|.....|:.|.:.|                    .|.||.:|..|...|..       
 Frog   187 CTECGKGFSAKSGLLTHQRLH--------------------TGEKRFSCTECGKRFTH------- 224

  Fly   585 IQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPVYICELCSVQCKRKF 649
                 |.:|.||:.:.:                             |.:| :.|    .:|.:.|
 Frog   225 -----KNTLVLHERFHT-----------------------------GEKP-FTC----TECGKGF 250

  Fly   650 EMIQ----HQRTMHRFDKMPHECDDC--IFKCVSKSIMDHHRQGQCSSTEKKHACGKCSYKFMWP 708
            ..:.    ||: :|..:| |..|.:|  ||  .||..::.|.  :..:.||...|.:|...|...
 Frog   251 ITVSFLKTHQK-VHTGEK-PFSCTECGKIF--TSKKGLNLHL--RTHTGEKPFTCTECGKSFSCK 309

  Fly   709 ENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDV 773
            .:|..|..: |::|.|                          .:|..||:.|..|..|..|: ..
 Frog   310 SHLRSHQNV-HTRSKV--------------------------FKCTECDKCYATKQSLEYHL-SA 346

  Fly   774 HINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMH 838
            | .|:|.       |.|:.||....:...|..|...|...|||.|..||..|...|.|..|:|:|
 Frog   347 H-TGERP-------FPCTECGKGFPNRHVLQKHTLIHLHLKPFTCGECEKCFSSKSHLNRHQRVH 403

  Fly   839 TGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCG 903
            ||||||.||.|||.|...:.|||||:.|:|.||..||.|.|::...|.|::|...||||.||.|.
 Frog   404 TGEKPFTCTECGKGFFHKNHLKRHMIIHTGEKPFTCTECGKTFPYEKSLRVHQAAHTGEKPFTCT 468

  Fly   904 TCGERFIQSSTLEKH 918
            .||:.|.|...|..|
 Frog   469 ECGKSFSQKGNLRAH 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 7/20 (35%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..422 CDD:275368 7/20 (35%)
C2H2 Zn finger 431..447 CDD:275368 0/15 (0%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 7/20 (35%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 638..659 CDD:275368 5/24 (21%)
C2H2 Zn finger 668..690 CDD:275368 7/23 (30%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 5/19 (26%)
COG5048 814..>886 CDD:227381 37/71 (52%)
C2H2 Zn finger 818..838 CDD:275368 8/19 (42%)
C2H2 Zn finger 846..866 CDD:275368 11/19 (58%)
C2H2 Zn finger 874..894 CDD:275368 7/19 (37%)
C2H2 Zn finger 902..924 CDD:275368 7/17 (41%)
znf568NP_001016087.1 C2H2 Zn finger 19..39 CDD:275368 8/21 (38%)
C2H2 Zn finger 47..67 CDD:275368 7/19 (37%)
zf-H2C2_2 59..83 CDD:463886 9/48 (19%)
C2H2 Zn finger 75..95 CDD:275368 6/19 (32%)
zf-H2C2_2 87..112 CDD:463886 9/108 (8%)
C2H2 Zn finger 103..123 CDD:275368 9/51 (18%)
COG5048 127..>439 CDD:227381 113/422 (27%)
C2H2 Zn finger 131..151 CDD:275368 6/19 (32%)
C2H2 Zn finger 159..179 CDD:275368 7/20 (35%)
C2H2 Zn finger 187..207 CDD:275368 5/19 (26%)
C2H2 Zn finger 215..235 CDD:275368 7/31 (23%)
C2H2 Zn finger 243..263 CDD:275368 5/24 (21%)
C2H2 Zn finger 271..291 CDD:275368 7/23 (30%)
C2H2 Zn finger 299..319 CDD:275368 5/20 (25%)
C2H2 Zn finger 327..347 CDD:275368 7/20 (35%)
C2H2 Zn finger 355..375 CDD:275368 5/19 (26%)
C2H2 Zn finger 383..403 CDD:275368 8/19 (42%)
C2H2 Zn finger 411..431 CDD:275368 11/19 (58%)
SUF4-like 435..>484 CDD:411020 22/49 (45%)
C2H2 Zn finger 439..460 CDD:411020 7/20 (35%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 7/17 (41%)
C2H2 Zn finger 467..484 CDD:411020 7/17 (41%)

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