DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and znf639

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_012818342.1 Gene:znf639 / 448534 XenbaseID:XB-GENE-963474 Length:430 Species:Xenopus tropicalis


Alignment Length:369 Identity:86/369 - (23%)
Similarity:141/369 - (38%) Gaps:91/369 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   559 RPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNES--GFELQLEDS- 620
            |.|.:....|..|:.:.:...||:.|:.|:.|.:.|        |...:..::  ..||.||.. 
 Frog   141 RANSSGLFRCEQCDYNSKYFSDLKQHMILKHKCAES--------HICKVCKQTFLSEELLLEHGK 197

  Fly   621 --ETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFK-CVSKSIMD 682
              |.|:|:          :|:.|..:......:.||....| |:...:.|:.|..: |.|..:..
 Frog   198 LHEEEEEL----------VCKHCDYKTSSFESLNQHVADAH-FNDFLYWCEQCDLQFCTSSELYL 251

  Fly   683 HHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDG 747
            |.::..|   ::::.|..|.::...||:|..|::.:|:...:.  ..|.:..|         |.|
 Frog   252 HFQEHSC---DEQYLCQFCEHETNDPEDLHSHVVNEHTCRLIE--LSDAYNNG---------EHG 302

  Fly   748 IPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTG 812
                          ..|.||.      |:.|:.:    ..|:|.:||..:|    |.|::.||..
 Frog   303 --------------QFSLLNK------ISFDKSK----NFFVCQVCGFSSR----LHTNVNRHVA 339

  Fly   813 EKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYC 877
            .:                       ||...|..|..|||.|:...:..:|:..||....:.|.||
 Frog   340 IE-----------------------HTRFFPHVCDDCGKGFSGMLEYSQHLNLHSSEGVYLCQYC 381

  Fly   878 EKSYRQAKDLKLHLQ-QHTGECPFVCGTCGERFIQSSTLEKHRL 920
            |.|..|.:|||.||. :|:.:.|..|..|..||.....|..|.|
 Frog   382 EYSTGQLEDLKTHLDFRHSTDMPHKCRKCLLRFGSEEKLNSHLL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368 4/20 (20%)
C2H2 Zn finger 668..690 CDD:275368 5/22 (23%)
C2H2 Zn finger 698..715 CDD:275368 5/16 (31%)
C2H2 Zn finger 753..774 CDD:275368 3/20 (15%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 17/71 (24%)
C2H2 Zn finger 818..838 CDD:275368 0/19 (0%)
C2H2 Zn finger 846..866 CDD:275368 6/19 (32%)
C2H2 Zn finger 874..894 CDD:275368 11/20 (55%)
C2H2 Zn finger 902..924 CDD:275368 7/19 (37%)
znf639XP_012818342.1 zf-H2C2_5 148..172 CDD:404746 6/23 (26%)
C2H2 Zn finger 150..171 CDD:275368 6/20 (30%)
C2H2 Zn finger 179..199 CDD:275368 4/19 (21%)
C2H2 Zn finger 207..224 CDD:275368 3/16 (19%)
C2H2 Zn finger 236..252 CDD:275368 4/15 (27%)
C2H2 Zn finger 321..342 CDD:275368 8/47 (17%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..399 CDD:275368 11/20 (55%)
C2H2 Zn finger 407..427 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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