DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and CG11902

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster


Alignment Length:961 Identity:354/961 - (36%)
Similarity:498/961 - (51%) Gaps:141/961 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DTDNLLKLATPSKKYPDKLLSEILCELTEINLDATGSQKFPQCLCSGCTKKLMGAYCYVKQAMAA 78
            |.|.....:|.|.:..|...||     ||::.:.|........||...:..||.           
  Fly   542 DFDRYYNASTESGQELDLFESE-----TELSDEETSKTSHICLLCGETSNSLMN----------- 590

  Fly    79 NELLMKHLKNGAAPTSTDCLQEAPMELCAEQHVEVKLETEDEDCGENDVTITCSELPEPDETDME 143
               ||||                  ::|.......:|....:.||...|:...  |.:......|
  Fly   591 ---LMKH------------------QICLHSDGVAELPCRCDYCGSGFVSKAL--LQQHRRHRCE 632

  Fly   144 SKKS-----VDPLTMIETVKLEMEPRSVEKPAYDDPTSDFEDEDSLDNLPLYNRIQKWKTGRKSV 203
            .|.|     :..:..|.....|...::     :.:.|.|.|:                   |.:.
  Fly   633 KKHSRFHCRICNIRFIWESNYEKHEKT-----HHNKTKDAEE-------------------RPTK 673

  Fly   204 YKCHDCPRSFKRFDFLKRHEMRVHKPETRL-YDCSLCIRKFSRSEALEAHLKIHRNSKRSANISE 267
            .||..|.:.|.....|.||: |:|:|::.. :||..|.|:|.|.:.|::|||:|..:....|   
  Fly   674 LKCDQCEKVFIWHKDLNRHK-RLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGNSDYIN--- 734

  Fly   268 HKKAKAVDLN-------LCKPHGYKLIECMICQSQYNKIADLRRHLEEHPDIVSLCGRPNMEPHE 325
             .:....|:|       |.:|||.|||:||||.|:::||:|||.||..|...:|..     |..:
  Fly   735 -NQPVVPDVNQEMILARLSRPHGCKLIQCMICLSRHSKISDLRSHLSSHQYELSFA-----EDRD 793

  Fly   326 L---AELFYPDSKD-LSEEQLINLIRKDLAAGI-YQRFYSITNQSGYEMDLDSSETDSDLDGDHD 385
            :   ::.||||.:: |.:::|..:|..|:.... ..||.||||::|.|::|:|||||:  :.:.:
  Fly   794 IPSASKAFYPDLENTLEKDELAEMIMADVQREFDLDRFISITNEAGLELNLESSETDT--ESEQE 856

  Fly   386 DQHKRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNES 450
            |.|.      ...|.|.||.....||:|||.||.:.|.|.:|..||..|..|||:..||.||:.:
  Fly   857 DNHS------SLNYPCNLCTTVVKRKHQLYAHQLEEHKWEEAVLVCSNCQTRFVNESLLDHHSRT 915

  Fly   451 QCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQ------------TFECSECKRVFDKKKSL 503
            .|.|.||.|.|.||||||||:.|||.|.....:.::            ..:|.:|.|.|..:|.|
  Fly   916 LCHNPQKLFQCRKCPLRFRWRENLKLHMEVFHMLDELSIQDDLPKVDGDLQCGKCNRSFRMQKDL 980

  Fly   504 TVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITC 568
            |.|.| :|.:||.:..|:||:|:|||...|::|:.|||:....:|.||.::.:...|.|.|::.|
  Fly   981 TRHTL-MHGQESNIFRCRWCARRFYRRANLLQHIARHGISVSQLPYAEAILDSYVNPGGRKKVEC 1044

  Fly   569 RMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDE------MQ 627
            |:||:.|..|..||.|::   .:....|..|.|..||||||:.|||:.|.||||:||      ..
  Fly  1045 RVCNVSFPTIAALRLHLE---TMPAGSHHDYSSLQNYSITNQMGFEMDLYDSETDDEDSRTHIKP 1106

  Fly   628 PGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSST 692
            ||..|.  |.|.:|.::|.||||:.|||:.|||.:|:...||.|:||.|...|:.||::.||.:.
  Fly  1107 PGAPSS--YTCNMCQLRCLRKFELYQHQQAMHRMEKISDGCDSCLFKSVCPEIISHHKRTQCENR 1169

  Fly   693 EKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCD 757
            ||:..|.:|.|||||..||..|:.|||.|:  .:...|...:.:||..|  ||..:  .||..|.
  Fly  1170 EKQFKCTRCGYKFMWESNLLLHMDLQHVKT--EDQELDESKEASGDEPK--TEGQV--FQCGLCT 1228

  Fly   758 RTYQMKSRLNNHIRDVHINGDRKRKEA-----------IKRFLCSLCGMETRSAAALVTHMRRHT 811
            |.|..|.||..|::..| ..|.|...|           .|||||:.||....|::.|:.||||||
  Fly  1229 RKYNRKDRLTAHLKKFH-GPDCKPSTAKTPNRPISPKEPKRFLCAFCGKAVSSSSNLIIHMRRHT 1292

  Fly   812 GEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTY 876
            |||||||:.|.|||||.|:|..|||.||||:|..||||.|.||||.||::||..|||.:|:||||
  Fly  1293 GEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTY 1357

  Fly   877 CEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDE 927
            ||||:.|:.||.||:::||||.|:.||.|||||||.:.|:.||:.:.|::|
  Fly  1358 CEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNHRMQQSHYEE 1408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 7/20 (35%)
C2H2 Zn finger 236..256 CDD:275368 9/19 (47%)
C2H2 Zn finger 401..422 CDD:275368 10/20 (50%)
C2H2 Zn finger 431..447 CDD:275368 7/15 (47%)
C2H2 Zn finger 461..481 CDD:275368 13/19 (68%)
C2H2 Zn finger 490..511 CDD:275368 9/20 (45%)
C2H2 Zn finger 520..540 CDD:275368 9/19 (47%)
C2H2 Zn finger 638..659 CDD:275368 10/20 (50%)
C2H2 Zn finger 668..690 CDD:275368 10/21 (48%)
C2H2 Zn finger 698..715 CDD:275368 9/16 (56%)
C2H2 Zn finger 753..774 CDD:275368 8/20 (40%)
C2H2 Zn finger 790..810 CDD:275368 8/19 (42%)
COG5048 814..>886 CDD:227381 47/71 (66%)
C2H2 Zn finger 818..838 CDD:275368 12/19 (63%)
C2H2 Zn finger 846..866 CDD:275368 13/19 (68%)
C2H2 Zn finger 874..894 CDD:275368 12/19 (63%)
C2H2 Zn finger 902..924 CDD:275368 12/21 (57%)
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368 9/52 (17%)
C2H2 Zn finger 610..629 CDD:275368 4/20 (20%)
C2H2 Zn finger 640..660 CDD:275368 2/24 (8%)
SUF4-like 673..>726 CDD:411020 20/53 (38%)
C2H2 Zn finger 676..703 CDD:411020 9/27 (33%)
C2H2 Zn finger 676..696 CDD:275368 7/20 (35%)
C2H2 Zn finger 706..726 CDD:411020 9/19 (47%)
C2H2 Zn finger 706..726 CDD:275368 9/19 (47%)
C2H2 Zn finger 762..782 CDD:275368 12/19 (63%)
C2H2 Zn finger 866..887 CDD:275368 10/20 (50%)
C2H2 Zn finger 896..918 CDD:275368 9/21 (43%)
C2H2 Zn finger 926..947 CDD:275368 13/20 (65%)
C2H2 Zn finger 967..987 CDD:275368 9/20 (45%)
C2H2 Zn finger 996..1016 CDD:275368 9/19 (47%)
C2H2 Zn finger 1044..1063 CDD:275368 9/21 (43%)
C2H2 Zn finger 1224..1244 CDD:275368 8/19 (42%)
C2H2 Zn finger 1271..1291 CDD:275368 8/19 (42%)
zf-H2C2_2 1283..1306 CDD:463886 16/22 (73%)
C2H2 Zn finger 1299..1319 CDD:275368 12/19 (63%)
C2H2 Zn finger 1327..1347 CDD:275368 13/19 (68%)
zf-H2C2_2 1340..1364 CDD:463886 15/23 (65%)
SFP1 <1349..1405 CDD:227516 32/55 (58%)
C2H2 Zn finger 1355..1375 CDD:275368 12/19 (63%)
C2H2 Zn finger 1383..1401 CDD:275368 11/17 (65%)
Blue background indicates that the domain is not in the aligned region.

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