DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and CG8301

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster


Alignment Length:945 Identity:186/945 - (19%)
Similarity:284/945 - (30%) Gaps:389/945 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CRTC----------DSTDTDNLLKLATPSKKYPDKLLSEILCELTEINLDATGSQKFPQCLCSGC 61
            ||||          :.::..:.|.|..|: .:|.: :::|..:....||..:.:...||.:||.|
  Fly     4 CRTCAISMFVCDFENGSNNSHFLDLHHPN-CWPSE-MAQIRLQFANWNLKISPNDGLPQKICSDC 66

  Fly    62 TKKLMGAYCYVKQAMAANELLMKHLKNGAAPTSTDCLQEAPMELCAEQHVEVKLET---EDEDCG 123
            ..|    :|.:.....|                  | |||.::|   .|:..|::.   ||::.|
  Fly    67 FTK----FCSINAFRLA------------------C-QEAQLKL---SHIYDKIDASSLEDDEIG 105

  Fly   124 ENDVTITCSELPEPDETDMESKKSVDPLTMIETVKLEMEPRSVEKPAYDDPTSDFEDEDSLDNLP 188
            :.|:        ||.|...|: ::..|.|   ||..|.:|.:..    .||...|.|...:|   
  Fly   106 QEDL--------EPAEEHQET-ETTKPTT---TVSAETQPNNTA----SDPIEIFVDAVDID--- 151

  Fly   189 LYNRIQKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETR---------LYDCSLCIRKFS 244
                               :.....:..:..::::..|.:|.|.         .|.|..|:|.  
  Fly   152 -------------------EAEEEEEEEEQQQQYDEEVEEPITDESAPPQLTISYACKFCLRP-- 195

  Fly   245 RSEALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEH 309
                                                            |..|    .|::.|.||
  Fly   196 ------------------------------------------------QENY----QLQQLLLEH 208

  Fly   310 PDIVSLCGRPNMEPHELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFYSITNQSGYEMDLDSS 374
                                                                             
  Fly   209 ----------------------------------------------------------------- 208

  Fly   375 ETDSDLDGDHDDQHKRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFV 439
                 ::..||.:.         .|:|..|:.:|........|.:.||  .:..|.||.|..::.
  Fly   209 -----INASHDPEQ---------PYNCPECEARFQDAASRTVHLKSSH--VEKQHACGVCGKKYG 257

  Fly   440 SLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFEC--SECKRVFDKKKS 502
            ....||||.|..  :::..|.|..|..||..:.:|..|.:.|....| |:|  |.|:|:|..::.
  Fly   258 DRHNLRHHVEKY--HSETDFECALCEKRFYTRKSLNYHMKWHNPDRQ-FKCRHSGCERLFISQRH 319

  Fly   503 LTVHLLSVHAEES--KLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKR 565
            |..| .:.|:..|  |...|.:|.:.|..    :|.|:.|..::|               .|.|.
  Fly   320 LMCH-EATHSGTSSRKSEHCGFCGKTFIH----LKTLRWHIYRQH---------------GGEKP 364

  Fly   566 ITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGV 630
            ..|..|...|....:.|.|: ||             .|..::|       .:|.||         
  Fly   365 YKCANCTEVFASYAEKRIHM-LE-------------RHRENLT-------AIERSE--------- 399

  Fly   631 GSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEKK 695
                   |.||......:.::|.|....|.                       .|.|.......|
  Fly   400 -------CMLCRQPFSSEPDLIHHMSAEHL-----------------------QRPGAPIIANNK 434

  Fly   696 HACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTY 760
            ..             |:|                .|..|.:|            |.||..|.:.:
  Fly   435 RV-------------LQQ----------------KRERQYSG------------LFQCGSCSQRF 458

  Fly   761 QMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAF 825
            .|||.|..|.. ||...||                                   |..|..|...|
  Fly   459 NMKSALERHAA-VHSEKDR-----------------------------------PHACPHCSKRF 487

  Fly   826 PRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGL-KPHKCTYCEKSYRQAKDLKL 889
            .|..::..|.:.|..|||..|.||||.||....|.:|.|:|..| |..||..|.::|...|.|:|
  Fly   488 KRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRL 552

  Fly   890 HLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRH 924
            |.:.|||:..:.|..|.|||:....|:.| :.:.|
  Fly   553 HQRTHTGKTYYKCDLCQERFVTHIKLKTH-MQKAH 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 0/20 (0%)
C2H2 Zn finger 236..256 CDD:275368 3/19 (16%)
C2H2 Zn finger 401..422 CDD:275368 4/20 (20%)
C2H2 Zn finger 431..447 CDD:275368 5/15 (33%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 7/22 (32%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 638..659 CDD:275368 5/20 (25%)
C2H2 Zn finger 668..690 CDD:275368 2/21 (10%)
C2H2 Zn finger 698..715 CDD:275368 2/16 (13%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 0/19 (0%)
COG5048 814..>886 CDD:227381 27/72 (38%)
C2H2 Zn finger 818..838 CDD:275368 5/19 (26%)
C2H2 Zn finger 846..866 CDD:275368 10/19 (53%)
C2H2 Zn finger 874..894 CDD:275368 7/19 (37%)
C2H2 Zn finger 902..924 CDD:275368 7/21 (33%)
CG8301NP_649915.1 zf-AD 3..88 CDD:462262 24/111 (22%)
COG5048 198..>508 CDD:227381 101/554 (18%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 8/19 (42%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 7/22 (32%)
C2H2 Zn finger 338..359 CDD:275368 6/24 (25%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 7/20 (35%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 10/19 (53%)
SUF4-like 536..>586 CDD:411020 18/50 (36%)
C2H2 Zn finger 537..558 CDD:411020 7/20 (35%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..586 CDD:411020 7/21 (33%)
C2H2 Zn finger 565..582 CDD:275368 7/17 (41%)

Return to query results.
Submit another query.