DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and CG11247

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:561 Identity:121/561 - (21%)
Similarity:182/561 - (32%) Gaps:231/561 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 LDSSETD-SDLDGDHDD--QHKRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCG 432
            :|..|.| .:.|...||  |.:.:|.:||.        :...||:                |||.
  Fly    56 VDEEEDDGGEQDSKDDDYVQPQLKKSARKG--------EPVKRKH----------------HVCS 96

  Fly   433 RCDGRF-VSLQLLRH---HNESQCRNAQKRFLCHKCPLRFRWKHNLKTHF---REHRITNQTFEC 490
            :|...| ....|.||   |::      ::...|..|...:|...|||.|.   .|||   :.|.|
  Fly    97 QCSKEFGGKTDLQRHMLIHSD------ERPHKCKDCGKSYRQAVNLKNHITTAHEHR---KQFVC 152

  Fly   491 SECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIA 555
            |:|.:.|..|:.|.:| :.:|:.| |..||..|.:||.|...|.:|:..|               
  Fly   153 SQCPKSFALKERLRLH-MRLHSGE-KPYPCDLCDKKFARGGQLQQHMVSH--------------- 200

  Fly   556 ATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDS 620
                                                                             
  Fly   201 ----------------------------------------------------------------- 200

  Fly   621 ETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHR 685
                                             |:.::.:|:                       
  Fly   201 ---------------------------------HKTSIQQFN----------------------- 209

  Fly   686 QGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPL 750
                        |.|||..|....||..|:              :||.||   :|.         
  Fly   210 ------------CTKCSASFSTNANLRVHM--------------ERHEQG---MEH--------- 236

  Fly   751 LQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKP 815
             :|..|:..:..:..|..||...|        ..:.:|.|.:|.........|.|||:|||..|.
  Fly   237 -RCSICENQFANELALRAHINQEH--------HKLTQFECEICHKMIEPDEDLATHMQRHTAVKT 292

  Fly   816 FKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEK- 879
            ..|::|...|.:.|:...|.||||||:|:.|.:|.:.||.|..||.|:..|:|.||.:|..||. 
  Fly   293 HVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDE 357

  Fly   880 -SYRQAKDLKLHLQQ-HTGECPFVCGTCGERFIQSSTLEKH 918
             ::.|...||.|::: |..:.|::|..|.:.|.....|:.|
  Fly   358 VAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSH 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368 2/20 (10%)
C2H2 Zn finger 431..447 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..481 CDD:275368 7/22 (32%)
C2H2 Zn finger 490..511 CDD:275368 7/20 (35%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 638..659 CDD:275368 1/20 (5%)
C2H2 Zn finger 668..690 CDD:275368 0/21 (0%)
C2H2 Zn finger 698..715 CDD:275368 7/16 (44%)
C2H2 Zn finger 753..774 CDD:275368 5/20 (25%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
zf-H2C2_2 802..825 CDD:290200 10/22 (45%)
COG5048 814..>886 CDD:227381 29/73 (40%)
C2H2 Zn finger 818..838 CDD:275368 6/19 (32%)
zf-H2C2_2 830..855 CDD:290200 11/24 (46%)
C2H2 Zn finger 846..866 CDD:275368 8/19 (42%)
zf-H2C2_2 859..883 CDD:290200 10/25 (40%)
C2H2 Zn finger 874..894 CDD:275368 7/22 (32%)
C2H2 Zn finger 902..924 CDD:275368 5/17 (29%)
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 58/360 (16%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
zf-H2C2_2 107..132 CDD:290200 6/30 (20%)
C2H2 Zn finger 123..144 CDD:275368 7/20 (35%)
C2H2 Zn finger 152..172 CDD:275368 7/20 (35%)
zf-H2C2_2 165..189 CDD:290200 10/25 (40%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 65/359 (18%)
C2H2 Zn finger 210..230 CDD:275370 8/33 (24%)
C2H2 Zn finger 238..260 CDD:275371 6/29 (21%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 6/19 (32%)
zf-H2C2_2 309..332 CDD:290200 11/22 (50%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 7/22 (32%)
C2H2 Zn finger 382..399 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I1302
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.060

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