DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Zfp948

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001002008.1 Gene:Zfp948 / 381066 MGIID:3040683 Length:667 Species:Mus musculus


Alignment Length:741 Identity:178/741 - (24%)
Similarity:284/741 - (38%) Gaps:175/741 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 YDCSLCIRKFSRSEALEAHLKIHRNSKRSANISE--HKKAKAVDLNLCKPHGYKLIECMICQSQY 296
            |...:.:.|:|..:.:..|::..:.|::...:.|  |:...      |.|  |...:.....:.|
Mouse    46 YSNLVFVEKYSVRDTVHQHVRTEKESRQCNELGEMLHEPTN------CAP--YNTSDTTETSNNY 102

  Fly   297 NKIADLRRHLE-EHPDIVSL--CGRPNMEPHELAELFYPD---SKDLSEEQLINLI----RKDLA 351
            ....|....:: .:||.:..  .|....|        |.|   |..::::|..|..    |::..
Mouse   103 RCCNDQDASVDSSNPDRLKSVHTGEERCE--------YKDCEKSSSIAQDQRTNSANKEQRQEKH 159

  Fly   352 AGIYQRFYSITNQS---GYEMDLDSSETDSDLDGDH-DDQHKRRKK---SRKATYSCELCQQKFP 409
            .|.:...:|:.:.|   ....:..:.|...:..|.| ...|...::   :|:..|.|..||:.|.
Mouse   160 GGHFSSTHSLKSSSIAQDQRTNSANKEQGQEKHGGHFSSTHSLMQQAIFNREKRYQCGQCQRCFS 224

  Fly   410 RKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNL 474
            ....|..||| .|: .:.|:.|..||..|.....|:.|  .:....:|.:.|.:|...|.....|
Mouse   225 TSANLTIHQR-IHT-GEKPYKCNFCDKSFAQCTTLKTH--QRLHTGEKPYKCKECGKSFPQLSAL 285

  Fly   475 KTHFREHRITNQTFECSECKRVF------------DKKKSLT-------VHLLSVHAEESKL--- 517
            |:|.:.| ...:.::|.||.|.|            .:.|..|       :|.||....:.:|   
Mouse   286 KSHQKMH-TGEKPYKCKECDRFFAHCSSFRRHQKTHRAKKHTGPDCGKDLHQLSHFKSDHRLHTG 349

  Fly   518 ---IPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFERIV 579
               ..|..|.|.|..::....|.|.|. .|.|                   ..|..|...|..::
Mouse   350 ENPYKCSECDRSFPHYELFRIHQKTHS-SEID-------------------YECEECGKSFTELL 394

  Fly   580 DLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPVYICELCSVQ 644
            .||.|.::                      .||..|                    |.|.    .
Mouse   395 QLRRHYKI----------------------HSGATL--------------------YKCR----D 413

  Fly   645 CKRKFEMIQH---QRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEKKHACGKCSYKFM 706
            |.:.|....|   .:|:|..:: |::|.||....:..|::..|:  ...:.||.:.|.:|...| 
Mouse   414 CDKSFTQYSHLQKHQTIHTGER-PYKCKDCEKSFLHNSLLRRHQ--SVHTGEKPYKCKECDKSF- 474

  Fly   707 WPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIR 771
                ....||.||.|.         ||:     ||.        .:|..||:::...:.|..|.|
Mouse   475 ----TRNSILRQHQKI---------HTK-----EKP--------YKCVECDKSFTQLTYLRTHQR 513

  Fly   772 DVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRR 836
             ||      .||  |.:.|::|.....:.|.|..|.|.||||:|::|..|..:|...:.|.:|::
Mouse   514 -VH------TKE--KPYNCTVCDKSFTTGATLRIHQRVHTGERPYRCTECGKSFREGTTLRTHKK 569

  Fly   837 MHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFV 901
            :||||||::||||.|.|.|...|:||...|:|.||:||..|:||:.:...|:.|.:.||.|.|:.
Mouse   570 IHTGEKPYNCTVCDKSFIRYSHLQRHQRVHTGEKPYKCMECDKSFTECFLLRKHQRIHTEEKPYK 634

  Fly   902 CGTCGERFIQSSTLEKHRLMRRHFDE 927
            |..|...|:..|.|.||:  :.|..|
Mouse   635 CKDCDLAFVCISNLRKHQ--KNHTGE 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368 3/19 (16%)
C2H2 Zn finger 401..422 CDD:275368 8/20 (40%)
C2H2 Zn finger 431..447 CDD:275368 5/15 (33%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 10/39 (26%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
C2H2 Zn finger 638..659 CDD:275368 5/23 (22%)
C2H2 Zn finger 668..690 CDD:275368 5/21 (24%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 31/71 (44%)
C2H2 Zn finger 818..838 CDD:275368 5/19 (26%)
C2H2 Zn finger 846..866 CDD:275368 10/19 (53%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 7/21 (33%)
Zfp948NP_001002008.1 KRAB 13..>53 CDD:214630 1/6 (17%)
COG5048 195..595 CDD:227381 125/509 (25%)
C2H2 Zn finger 216..236 CDD:275368 8/20 (40%)
C2H2 Zn finger 244..264 CDD:275368 6/21 (29%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
C2H2 Zn finger 328..346 CDD:275368 3/17 (18%)
C2H2 Zn finger 355..375 CDD:275368 6/19 (32%)
C2H2 Zn finger 383..403 CDD:275368 6/41 (15%)
C2H2 Zn finger 411..431 CDD:275368 5/23 (22%)
C2H2 Zn finger 439..459 CDD:275368 5/21 (24%)
C2H2 Zn finger 467..487 CDD:275368 8/33 (24%)
C2H2 Zn finger 495..515 CDD:275368 6/20 (30%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
C2H2 Zn finger 551..571 CDD:275368 5/19 (26%)
C2H2 Zn finger 579..599 CDD:275368 10/19 (53%)
zf-H2C2_2 591..615 CDD:463886 12/23 (52%)
C2H2 Zn finger 607..627 CDD:275368 6/19 (32%)
C2H2 Zn finger 635..655 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

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