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Protein Alignment CG18476 and Zfp655

DIOPT Version :9

Sequence 1:	NP_731615.1	Gene:	CG18476 / 41404	FlyBaseID:	FBgn0037931	Length:	936	Species:	Drosophila melanogaster
Sequence 2:	XP_038945478.1	Gene:	Zfp655 / 360764	RGDID:	1309158	Length:	607	Species:	Rattus norvegicus

Alignment Length:	612	Identity:	128/612 - (20%)
Similarity:	220/612 - (35%)	Gaps:	152/612 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   421 SHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFL------------------------- 460
            |...:::|.|      :|.||:     ::|:|.:.:.|||
  Rat     6 SQEAAESPRV------QFQSLE-----SQSECLSPELRFLRDTEMEQGYTDGVCDIRGCGCASYS 59

  Fly   461 --------C-----HKCPLRFRWKHNLKTH-------------FREHRITNQTFECSECKRVFDK 499
                    |     .:..:|..||.....|             |.....:...|..|:...:..:
  Rat    60 RGVGMPGPCSEGALQRSDVRELWKRGFTGHTSPPSHHPDSLCEFLPSPESYPGFPISKPDGISQR 124

  Fly   500 KKSLTVHLLSVH--------------AEESK-LIPCQWCSRKFYRHDYLVKHLKRHGLKEHDI-P 548
            ::.|.|..|...              .||:| |||.:..|.:.  |.|.|    |.|..:.|| .
  Rat   125 EQDLQVFDLETQNREGVRNDCSDGETREENKLLIPKRKISEEV--HSYKV----RVGKFKQDIAQ 183

  Fly   549 LAETLIAATSRPNGAKRITCRMCNLHFERIVD-LRAHIQLE--------LKLSLSLHQSYDSPHN 604
            :.||..|..|..             ..||:.: ||..:.||        .|.:.|..::.:...:
  Rat   184 VPETREAYKSED-------------RLERLQEILRKFLFLEREFRQITISKKTFSNEKNTEPEKS 235

  Fly   605 YSI-----TNESGFELQLEDSETED---EMQPGVGSR-PVYICE-LCSVQCKRKFEMIQHQRTMH 659
            :|:     |::....:|..|....|   ...|.||.: |:.:.| ..:...|.....:.|   ::
  Rat   236 FSLDSTLDTDQRVLRIQTIDDSKYDMNFNQNPAVGEQEPINLTENFQNTDYKESLMDLSH---LN 297

  Fly   660 RFDKMP-----HECDDCIFKCVSKSIMDHHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQH 719
            :::.||     ::||.|.......|.:..|:  :..:.||.:.|.:|...|....:|.:|..:..
  Rat   298 KWESMPTTDRSYKCDTCGKTFHQASALTRHQ--RIHTREKPYKCKECEKSFSQSSSLSRHKRIHT 360

  Fly   720 SKSSVSNPTGDRH--------TQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHIN 776
            .:.|......|:.        :|.:..|:...........:|..|:|.:.....|..|
  Rat   361 REKSYRCEASDKSCDASDKSCSQSSDVLQHKKVHAKAKSYKCGTCERVFSRSVHLTQH------- 418

  Fly   777 GDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGE 841
             .|..|:...:  |::||.:....:.||.|.|.|..||.::.|.|.:|:.:...:...      |
  Rat   419 -QRTHKDTACK--CTVCGSDFCHTSYLVEHQRLHHQEKSYEYDECGLAYVKQQGIRFR------E 474

  Fly   842 KPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCG 906
            ||:.|..|||||..:..|.:|...|:|.|.|:|....|::.|...|..|.:.|..|..:......
  Rat   475 KPYSCNECGKDFRLNSHLVQHQRIHTGEKLHECNERGKAFSQTSCLSQHHKMHRKEKSYEYNNYE 539

  Fly   907 ERFIQSS--TLEKHRLMRRHFDEVEAW 931
            |.|..:|  ||::...:|....:.:||
  Rat   540 ESFSHNSDLTLQQEVPIRERVFDCDAW 566

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.