DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and CG30431

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster


Alignment Length:588 Identity:123/588 - (20%)
Similarity:186/588 - (31%) Gaps:238/588 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 CELCQQKFPRKY-QLYDHQRQ--------------SHSWSDAPHVCGRCDGRFVSLQLLRHHNES 450
            |..|..:.|..| .|||...|              .|..:....:|..|        |.|.|:  
  Fly    12 CRCCLLEQPPLYHSLYDASSQLAVELKALAPALRLEHGDNLTDVICDLC--------LRRLHD-- 66

  Fly   451 QCRNAQKRFLCHKCPLRFR---WKHNLKTHFREHRITNQTFECSECKRVFDKKKSLTVHLLSVHA 512
             .|:.|:|....:..||.|   |||.:..  .:....:...||.| :.|...:..::|.|     
  Fly    67 -ARDFQRRCEHSEQVLRMRHEHWKHTVAV--GDALALDDVLECLE-REVGSLEGPMSVPL----- 122

  Fly   513 EESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFER 577
            :.||  |....:......|:.....:.....|||||                        .::|.
  Fly   123 QASK--PVAHVAPLMETVDFESLDFQDSSHSEHDIP------------------------SYWES 161

  Fly   578 IVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQ----LEDSE----------------- 621
            .||               ..|.::||:...|.|. |.::    .|.||                 
  Fly   162 SVD---------------SGSLNTPHHQPETAEL-FAVEPPTPPESSEEPAPDAAEKPKMRRARP 210

  Fly   622 TEDEMQP-------GVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKS 679
            .:|.::|       .|..|.::.|..|..:..|.|::..|...:|...:|.::|::|        
  Fly   211 RQDNVKPKERKASGAVHPRSLHPCPECEKKFTRNFQLKLHMTAVHGMGEMRYQCEEC-------- 267

  Fly   680 IMDHHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKS--SVSNPTGDRHTQGTGDLEKD 742
                         .|..|              .:|.|..|.||  |...|.|             
  Fly   268 -------------RKNFA--------------SRHSLRYHVKSVHSTERPFG------------- 292

  Fly   743 ATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHM 807
                      |.||||.:.::::                                     |::|:
  Fly   293 ----------CQHCDRRFILRTQ-------------------------------------LLSHL 310

  Fly   808 RRHTGE-KP--FKCDLCEMAFPRHSELASHRRMHTG--EKPFHCTVCGKDFARSDKLKRHMLTHS 867
            |.|||| ||  |:|..|..::|..|:|.:|.|.|..  |:||.|..|.|.|.....|..|:|.|:
  Fly   311 RTHTGEAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCSKAFFTRGHLNSHLLVHT 375

  Fly   868 GLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEVEAWL 932
            |.||..|.||:|.|:...:|..|                             ::|.|.|.:||.|
  Fly   376 GEKPFACEYCDKCYQSVGNLNNH-----------------------------MVRLHADIIEAQL 411

  Fly   933 RRQ 935
            ..:
  Fly   412 EAE 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368 8/35 (23%)
C2H2 Zn finger 431..447 CDD:275368 4/15 (27%)
C2H2 Zn finger 461..481 CDD:275368 6/22 (27%)
C2H2 Zn finger 490..511 CDD:275368 5/20 (25%)
C2H2 Zn finger 520..540 CDD:275368 1/19 (5%)
C2H2 Zn finger 638..659 CDD:275368 5/20 (25%)
C2H2 Zn finger 668..690 CDD:275368 2/21 (10%)
C2H2 Zn finger 698..715 CDD:275368 0/16 (0%)
C2H2 Zn finger 753..774 CDD:275368 5/20 (25%)
C2H2 Zn finger 790..810 CDD:275368 3/19 (16%)
COG5048 814..>886 CDD:227381 30/75 (40%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
C2H2 Zn finger 846..866 CDD:275368 7/19 (37%)
C2H2 Zn finger 874..894 CDD:275368 7/19 (37%)
C2H2 Zn finger 902..924 CDD:275368 1/21 (5%)
CG30431NP_610211.1 zf-AD 11..82 CDD:214871 17/80 (21%)
KREPA <181..>257 CDD:483960 14/75 (19%)
SFP1 <233..285 CDD:227516 16/86 (19%)
C2H2 Zn finger 234..255 CDD:275368 5/20 (25%)
C2H2 Zn finger 264..285 CDD:275368 9/55 (16%)
C2H2 Zn finger 293..313 CDD:275368 8/56 (14%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 366..389 CDD:463886 11/22 (50%)
C2H2 Zn finger 382..403 CDD:275368 8/49 (16%)
Blue background indicates that the domain is not in the aligned region.

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