DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and LOC3290708

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_563202.4 Gene:LOC3290708 / 3290708 VectorBaseID:AGAMI1_007329 Length:352 Species:Anopheles gambiae


Alignment Length:369 Identity:99/369 - (26%)
Similarity:151/369 - (40%) Gaps:90/369 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 VDLRAHIQLEL---------KLSLSLHQSYDSPHNY--SIT--NESGFELQLEDSETEDEMQPGV 630
            :||:...|:|.         :|.||..:|.|....|  ||.  :|:.| ::.....|..|:... 
Mosquito     1 MDLKDESQIEFTITSFTTCCRLCLSCSESEDYYDIYLSSIASHSETTF-VEAIQKITNVELISN- 63

  Fly   631 GSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKM------PHECDD--------------CIFKC 675
            ...|..||..|:.:....|..:   |..||.::|      ..|||.              |....
Mosquito    64 SKLPSKICRNCAARIDDAFCFV---RDFHRTNEMLQNYLDNEECDKEEAEEIDLTTVQELCELDL 125

  Fly   676 VSKSIM------DHHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQ 734
            ..:.|:      :..|:|   |.|.:|           |:: ||.:..:|  .:...|:|.  .:
Mosquito   126 TDQQIVTDEENENEQREG---SKESEH-----------PDD-EQLVHQRH--DTPEQPSGT--NR 171

  Fly   735 G------------TGDLEKDATEDGIPLL-QCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIK 786
            |            |...:|....|...|. ||..||:::..:|.|.:|:| :|..        :|
Mosquito   172 GLTAVDFILQQITTSPQKKKRRPDKSALKHQCNECDKSFLRRSNLVDHLR-LHAQ--------LK 227

  Fly   787 RFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGK 851
            .|.|..|......:..|.:|||.||.|:|::|.:|:..|.:.|.|.:|...||..|||.|.||.|
Mosquito   228 VFACDFCDKRFVQSGNLKSHMRTHTAERPYRCSMCQKGFTQSSALKTHMLAHTNTKPFACDVCDK 292

  Fly   852 DFARSDKLKRHMLTHSGLKPHKCTYC-EKSYRQAKDLKLHLQQH 894
            .|..|..|.:|.||||..|.::|..| |:.:.|    |:||:.|
Mosquito   293 AFVSSSDLCKHKLTHSAQKRYRCVICPERFFTQ----KVHLRNH 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368 4/20 (20%)
C2H2 Zn finger 668..690 CDD:275368 6/41 (15%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 29/72 (40%)
C2H2 Zn finger 818..838 CDD:275368 6/19 (32%)
C2H2 Zn finger 846..866 CDD:275368 9/19 (47%)
C2H2 Zn finger 874..894 CDD:275368 7/20 (35%)
C2H2 Zn finger 902..924 CDD:275368
LOC3290708XP_563202.4 zf-AD 19..98 CDD:462262 21/83 (25%)
SFP1 <142..308 CDD:227516 57/193 (30%)
C2H2 Zn finger 203..223 CDD:275368 7/20 (35%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
zf-H2C2_2 243..268 CDD:463886 11/24 (46%)
C2H2 Zn finger 259..279 CDD:275368 6/19 (32%)
C2H2 Zn finger 287..307 CDD:275368 9/19 (47%)
C2H2 Zn finger 315..337 CDD:275368 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.

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