DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and zgc:165515

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001092697.1 Gene:zgc:165515 / 323052 ZFINID:ZDB-GENE-030131-1772 Length:325 Species:Danio rerio


Alignment Length:320 Identity:88/320 - (27%)
Similarity:137/320 - (42%) Gaps:53/320 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   600 DSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKM 664
            :.|.:.|.|.|:..:..::.:||:..          :.|:.|......|..:.:|.|| |.. |.
Zfish    46 EEPFSCSQTTEACTQTTVQSTETKCS----------FTCQECGKMFDNKSNLRRHLRT-HTV-KE 98

  Fly   665 PHECDDCIFKCVSKSIMD-HHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPT 728
            ...|..|.....::..:| |.|:.:|:.    ::|.:|...|.....||.|:...      |.|.
Zfish    99 DFSCQKCNTSFTNQKSLDAHSRRYRCTI----YSCKRCGRIFPARGGLEVHMRFH------SAPL 153

  Fly   729 GDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLC 793
            |                     |.|.||:|.::::|....|:|...|:|         .|.|.||
Zfish   154 G---------------------LSCYHCERGFKLESTYKRHMRVHFIDG---------CFTCQLC 188

  Fly   794 GMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDK 858
            ..:.:|......|||.||||:||.||.|::.|...:.|.:|.::|..:|.|.|..|||.||::..
Zfish   189 ERKCQSLNVFQEHMRIHTGERPFSCDYCKVGFTGKAGLKNHIKVHHEDKAFICKRCGKSFAQNAH 253

  Fly   859 LKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKH 918
            ||.||.:|:..:..||..|.|.:........|::.|..|.|:.|..|...|:.|..||.|
Zfish   254 LKIHMNSHAKKRTFKCQVCGKDFSSENVFNCHMKCHRIEKPYTCAQCQRNFVTSRGLESH 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368 6/20 (30%)
C2H2 Zn finger 668..690 CDD:275368 5/22 (23%)
C2H2 Zn finger 698..715 CDD:275368 5/16 (31%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 7/19 (37%)
zf-H2C2_2 802..825 CDD:290200 12/22 (55%)
COG5048 814..>886 CDD:227381 26/71 (37%)
C2H2 Zn finger 818..838 CDD:275368 6/19 (32%)
zf-H2C2_2 830..855 CDD:290200 10/24 (42%)
C2H2 Zn finger 846..866 CDD:275368 10/19 (53%)
zf-H2C2_2 859..883 CDD:290200 9/23 (39%)
C2H2 Zn finger 874..894 CDD:275368 4/19 (21%)
C2H2 Zn finger 902..924 CDD:275368 7/17 (41%)
zgc:165515NP_001092697.1 zf-C2H2 72..94 CDD:278523 6/22 (27%)
C2H2 Zn finger 74..94 CDD:275368 6/20 (30%)
C2H2 Zn finger 102..120 CDD:275368 4/17 (24%)
C2H2 Zn finger 129..149 CDD:275368 6/19 (32%)
C2H2 Zn finger 185..205 CDD:275368 7/19 (37%)
C2H2 Zn finger 213..233 CDD:275368 6/19 (32%)
C2H2 Zn finger 241..261 CDD:275368 10/19 (53%)
C2H2 Zn finger 269..289 CDD:275368 4/19 (21%)
C2H2 Zn finger 297..317 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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