DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and CG32772

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster


Alignment Length:248 Identity:73/248 - (29%)
Similarity:111/248 - (44%) Gaps:44/248 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 ENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDV 773
            :|.:|....|....|.|:....:....:.|::....|:|    .||.|::|:..||.|..|||: 
  Fly    93 QNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEG----SCPLCNKTFSRKSSLMTHIRN- 152

  Fly   774 HINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMH 838
                    ..|.::|:|:.|......||.|..|.|.||.::|::|..|...|.:.:.|.:|||:|
  Fly   153 --------HSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLH 209

  Fly   839 TGEKPFHCT--VCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTG----- 896
            |||:||.|.  .||:.||:...|..||.:|..::.:.|..|.|.:.|...|..|||.|.|     
  Fly   210 TGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVTGYY 274

  Fly   897 --EC----------------------PFVCGTCGERFIQSSTLEKHRLMRRHF 925
              .|                      |:.|..|.|:|:|.:.|::|..|...|
  Fly   275 CPRCPEKNFKLQSQLHTHMKTHGLAFPYECDKCDEKFLQQAHLDQHLKMHDEF 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 668..690 CDD:275368
C2H2 Zn finger 698..715 CDD:275368 2/5 (40%)
C2H2 Zn finger 753..774 CDD:275368 10/20 (50%)
C2H2 Zn finger 790..810 CDD:275368 7/19 (37%)
zf-H2C2_2 802..825 CDD:290200 8/22 (36%)
COG5048 814..>886 CDD:227381 27/73 (37%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
zf-H2C2_2 830..855 CDD:290200 14/26 (54%)
C2H2 Zn finger 846..866 CDD:275368 8/21 (38%)
zf-H2C2_2 859..883 CDD:290200 7/23 (30%)
C2H2 Zn finger 874..894 CDD:275368 8/19 (42%)
C2H2 Zn finger 902..924 CDD:275368 8/21 (38%)
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 67/217 (31%)
C2H2 Zn finger 133..153 CDD:275368 10/28 (36%)
zf-H2C2_2 145..170 CDD:290200 8/33 (24%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 173..198 CDD:290200 9/24 (38%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
C2H2 Zn finger 217..239 CDD:275368 8/21 (38%)
zf-H2C2_2 231..256 CDD:290200 7/24 (29%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..296 CDD:275368 1/20 (5%)
C2H2 Zn finger 304..324 CDD:275368 7/19 (37%)
C2H2 Zn finger 331..351 CDD:275368
C2H2 Zn finger 359..380 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I1302
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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