DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and Zfp574

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_038967305.1 Gene:Zfp574 / 308434 RGDID:1311420 Length:909 Species:Rattus norvegicus


Alignment Length:913 Identity:200/913 - (21%)
Similarity:287/913 - (31%) Gaps:304/913 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 RKSVYKCHDCPRSFKRFDFLKRHE---MRVHKPE-----------------TRLYDCSLCIRKFS 244
            ::|.|:|.:|.:.......|..|:   :::..|:                 |..|:|..|...|:
  Rat    83 QESQYQCLECGQLLLSPSQLLEHQELHLKMMAPQEAVPAEPPPKVPPLSSSTIHYECVDCKALFA 147

  Fly   245 RSEALEAHLKIHRN---SKRSANI------------------SEHKKAKA--------------- 273
            ..|...:|.:.|..   :|..|.:                  .||...||               
  Rat   148 SQEMWLSHRQTHLRATPNKAPAPVVLGSPVVLGPPVGQARVAVEHSYRKAEEGGEGAAVPSVAAA 212

  Fly   274 ------VDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEH-PDIVSLCGRPNMEPHEL----- 326
                  |:|.|.|        |..|...:...||...|...| |..|.....|..:...|     
  Rat   213 TEMVTEVELLLYK--------CSECSQLFQMPADFLEHQATHFPAPVPEAEEPATQQETLVPSPT 269

  Fly   327 -AELFYPDSKDLSEE--QLINLIRKDLAAGIYQR----FYSITNQSGYEMDLDSSETDSDLDGDH 384
             |.:..||....|:.  :|.|.:|...|.|..:|    ..|.:.:||...:|..|..|......|
  Rat   270 EAAVSQPDPLPASDHSYELRNELRNGEAMGRDRRGRKPRRSSSGESGATQELFCSACDQIFLSPH 334

  Fly   385 D-DQHKRRKKSRKATYSCELCQQKFPR----KYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLL 444
            . .||.|  ..|:..:.|.||.:.||.    ...|.||..:||      .:|..|...|.:..||
  Rat   335 QLQQHLR--SHREGVFKCPLCSRVFPSPSSLDQHLGDHSSESH------FLCVDCGLAFGTEALL 391

  Fly   445 RHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITN------------------------ 485
            ..|..:...|.     .|.||....:. || |.|..||.|:                        
  Rat   392 LAHRRAHTPNP-----LHSCPCGKTFV-NL-TKFLYHRRTHGAGGVPLPTTPVPPEEPAISFPEP 449

  Fly   486 --------------------------QTFECSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCS 524
                                      .|:.|..|.|.|.|...||.|...||..|.: ..|..|.
  Rat   450 APAETGELEAPELPVSEESSAEPAAPGTYRCLLCSREFSKALQLTRHQRFVHRLERR-HKCSICG 513

  Fly   525 RKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLEL 589
            :.|.:..::..||:.|                    .|.:...|..|:..|....:|..|     
  Rat   514 KMFKKKSHVRNHLRTH--------------------TGERPFPCPDCSKPFNSPANLARH----- 553

  Fly   590 KLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQH 654
                            .:|:                    .|.|| |.|..|.....:...:.||
  Rat   554 ----------------RLTH--------------------TGERP-YRCGDCGKAFTQSSTLRQH 581

  Fly   655 QRTMHRFDKMPHECDDC--IFKCVSKSIMD-HHRQGQCSSTEKKHACGKCSYKFMWPENLEQHIL 716
             |.:|. ...|:.|.:|  .|....:.:|. :|..|     |..:.|.:|...|:....||.|.|
  Rat   582 -RLVHA-QHFPYRCQECGVRFHRPYRLLMHRYHHTG-----EYPYKCRECPRSFLLRRLLEVHQL 639

  Fly   717 LQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKR 781
            :.|:                          |....:||.|...:....||..|      ......
  Rat   640 VVHA--------------------------GRQPHRCPSCGAAFPSSLRLREH------RCAAAA 672

  Fly   782 KEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKP------------------------------- 815
            .:|.:||.|..||.:..|||.|..|...|....|                               
  Rat   673 AQAPRRFECGTCGKKVGSAARLQAHEAAHAAAGPGEVLAKEPPAPRAARATRTPVAPSPTALGGT 737

  Fly   816 -------------FKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHS 867
                         .:|..|:..|...:.|..|||:||||:|:.|..|||.|.:|..||.|...|:
  Rat   738 TSAAPAAPARRRGLECSECKKLFSTETSLQVHRRIHTGERPYPCPDCGKAFRQSTHLKDHRRLHT 802

  Fly   868 GLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEVEAWL 932
            |.:|..|..|.|::..:..|..|.:.||||.|:.|..||:.:...|.|.|||  :.|..:.:|.:
  Rat   803 GERPFACEVCGKAFAISMRLAEHRRIHTGERPYSCPDCGKSYRSFSNLWKHR--KTHQQQHQAAV 865

  Fly   933 RRQ 935
            |:|
  Rat   866 RQQ 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 4/23 (17%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
C2H2 Zn finger 401..422 CDD:275368 8/24 (33%)
C2H2 Zn finger 431..447 CDD:275368 5/15 (33%)
C2H2 Zn finger 461..481 CDD:275368 7/19 (37%)
C2H2 Zn finger 490..511 CDD:275368 8/20 (40%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 638..659 CDD:275368 5/20 (25%)
C2H2 Zn finger 668..690 CDD:275368 6/24 (25%)
C2H2 Zn finger 698..715 CDD:275368 5/16 (31%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 8/19 (42%)
COG5048 814..>886 CDD:227381 28/115 (24%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
C2H2 Zn finger 846..866 CDD:275368 9/19 (47%)
C2H2 Zn finger 874..894 CDD:275368 5/19 (26%)
C2H2 Zn finger 902..924 CDD:275368 8/21 (38%)
Zfp574XP_038967305.1 C2H2 Zn finger 323..343 CDD:275368 6/21 (29%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..425 CDD:275368 8/20 (40%)
lambda-1 469..>503 CDD:212564 11/33 (33%)
C2H2 Zn finger 480..501 CDD:275368 8/20 (40%)
COG5048 507..861 CDD:227381 102/456 (22%)
C2H2 Zn finger 509..529 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 5/40 (13%)
C2H2 Zn finger 565..585 CDD:275368 5/20 (25%)
C2H2 Zn finger 593..613 CDD:275368 4/19 (21%)
C2H2 Zn finger 621..642 CDD:275368 7/20 (35%)
C2H2 Zn finger 650..667 CDD:275368 6/22 (27%)
C2H2 Zn finger 753..773 CDD:275368 7/19 (37%)
C2H2 Zn finger 781..801 CDD:275368 9/19 (47%)
C2H2 Zn finger 809..829 CDD:275368 5/19 (26%)
C2H2 Zn finger 837..857 CDD:275368 8/21 (38%)

Return to query results.
Submit another query.