DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Ikzf1

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_006251553.1 Gene:Ikzf1 / 305501 RGDID:1562979 Length:514 Species:Rattus norvegicus


Alignment Length:203 Identity:60/203 - (29%)
Similarity:92/203 - (45%) Gaps:33/203 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 PENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRD 772
            ||:|......|:|||       ||.......:|..:.|:.         .|..:|.......:|.
  Rat    34 PEDLSTSGAQQNSKS-------DRGMASNVKVETQSDEEN---------GRACEMNGECAEDLRM 82

  Fly   773 VHINGDR-------KRKEAIK----------RFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDL 820
            :..:|::       :...|:.          :..|.:||:.......|:.|.|.||||:||:|:.
  Rat    83 LDASGEKMNGSHRDQGSTALSGVGGIRLPNGKLKCDICGIVCIGPNVLMVHKRSHTGERPFQCNQ 147

  Fly   821 CEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAK 885
            |..:|.:...|..|.::|:|||||.|.:|.....|.|.|..|:.|||..|||||.||.:||:|..
  Rat   148 CGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRDALTGHLRTHSVGKPHKCGYCGRSYKQRS 212

  Fly   886 DLKLHLQQ 893
            .|:.|.::
  Rat   213 SLEEHKER 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 668..690 CDD:275368
C2H2 Zn finger 698..715 CDD:275368 3/6 (50%)
C2H2 Zn finger 753..774 CDD:275368 3/20 (15%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
zf-H2C2_2 802..825 CDD:290200 11/22 (50%)
COG5048 814..>886 CDD:227381 32/71 (45%)
C2H2 Zn finger 818..838 CDD:275368 5/19 (26%)
zf-H2C2_2 830..855 CDD:290200 10/24 (42%)
C2H2 Zn finger 846..866 CDD:275368 6/19 (32%)
zf-H2C2_2 859..883 CDD:290200 14/23 (61%)
C2H2 Zn finger 874..894 CDD:275368 8/20 (40%)
C2H2 Zn finger 902..924 CDD:275368
Ikzf1XP_006251553.1 C2H2 Zn finger 117..137 CDD:275368 6/19 (32%)
zf-H2C2_2 130..154 CDD:404364 12/23 (52%)
COG5048 141..>420 CDD:227381 34/80 (43%)
C2H2 Zn finger 145..165 CDD:275368 5/19 (26%)
zf-H2C2_2 157..182 CDD:404364 10/24 (42%)
C2H2 Zn finger 173..193 CDD:275368 6/19 (32%)
C2H2 Zn finger 201..222 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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