DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Ikzf3

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001100517.1 Gene:Ikzf3 / 303511 RGDID:1307024 Length:509 Species:Rattus norvegicus


Alignment Length:229 Identity:67/229 - (29%)
Similarity:100/229 - (43%) Gaps:39/229 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 PENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGI------------------PLLQCP 754
            ||.|..:.|  .....:.|..|   |:...:.::||.||.:                  |::...
  Rat    23 PEALNDYSL--PKPHEIENVDG---TEAPANEDEDAGEDLMMKVKDEYSERDENILKPEPMVDAE 82

  Fly   755 HCDRTYQMK---SRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPF 816
            ..:..|...   |...|...:.|...|..|..:.| ..|.:||:...|...|:.|.|.||||:||
  Rat    83 ESEPPYSYAREYSDYENIKLERHGPYDSSRPTSGK-MNCDVCGLSCISFNVLMVHKRSHTGERPF 146

  Fly   817 KCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSY 881
            :|:.|..:|.:...|..|.::|||||||.|.:|.....|.|.|..|:.|||..||:||.:|.:||
  Rat   147 QCNQCGASFTQKGNLLRHIKLHTGEKPFKCHLCNYACQRRDALTGHLRTHSVEKPYKCEFCGRSY 211

  Fly   882 RQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTL 915
            :|    :..|::|...|        ..|:|:..|
  Rat   212 KQ----RSSLEEHKERC--------RAFLQNPDL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 668..690 CDD:275368
C2H2 Zn finger 698..715 CDD:275368 3/6 (50%)
C2H2 Zn finger 753..774 CDD:275368 3/23 (13%)
C2H2 Zn finger 790..810 CDD:275368 7/19 (37%)
zf-H2C2_2 802..825 CDD:290200 11/22 (50%)
COG5048 814..>886 CDD:227381 31/71 (44%)
C2H2 Zn finger 818..838 CDD:275368 5/19 (26%)
zf-H2C2_2 830..855 CDD:290200 11/24 (46%)
C2H2 Zn finger 846..866 CDD:275368 6/19 (32%)
zf-H2C2_2 859..883 CDD:290200 12/23 (52%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 3/14 (21%)
Ikzf3NP_001100517.1 COG5048 <107..>219 CDD:227381 46/116 (40%)
C2H2 Zn finger 120..140 CDD:275368 7/19 (37%)
zf-H2C2_2 133..157 CDD:290200 12/23 (52%)
C2H2 Zn finger 148..168 CDD:275368 5/19 (26%)
zf-H2C2_2 160..183 CDD:290200 11/22 (50%)
C2H2 Zn finger 176..196 CDD:275368 6/19 (32%)
zf-H2C2_2 192..213 CDD:290200 11/20 (55%)
C2H2 Zn finger 204..220 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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