DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Zfp473

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001414640.1 Gene:Zfp473 / 292884 RGDID:1305084 Length:967 Species:Rattus norvegicus


Alignment Length:949 Identity:231/949 - (24%)
Similarity:362/949 - (38%) Gaps:245/949 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LKNGAAPTSTDC-------LQEAPMELCAEQHVEVKLETED---EDC-GEN--DVTITCSE-LPE 136
            ::.|...||.:.       ||...:|....|.:|: ..||:   |.| |||  |..:...| ||.
  Rat    86 VRGGPEATSDEATEAKNPPLQSGFLEEDLSQIMEI-FSTEELNFESCIGENWFDSFLGDPESLPR 149

  Fly   137 PD------ETDM---ESKKSVDP----LTMIETVKLEMEPRSVEKPAYDDPTSDFEDEDSLDNLP 188
            ||      .||.   ||:..:.|    .|....|..:...::::.....:..||...:||:.   
  Rat   150 PDISNKESPTDRRCHESESGLSPGPPHCTREGAVMSDSPEKNLDPVILKESRSDLSQQDSVQ--- 211

  Fly   189 LYNRIQKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVH-----------------------KPE 230
                      |::.:|||.:|.:||.:...|.:|.: :|                       :|.
  Rat   212 ----------GQEKLYKCSECGKSFSQSYHLIQHWV-IHARGELPAWQEQPGALSKGALLLMQPG 265

  Fly   231 TRL----YDCSLCIRKFSRSEALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPH-------GY 284
            |:.    |.|..|.:.||::..|:.|.|||...|.....|:         ||.||.       |.
  Rat   266 TQTSSESYVCQECGKSFSQNMYLQWHQKIHTGEKLCKTQSD---------NLEKPSKGPSDEPGK 321

  Fly   285 KLIECMICQSQYNKIADLRRHLEEHPDIVSLCGRPNMEPHELAELF---YPDSKDLSEEQLINLI 346
            :|:.   ..:...|:.|.|...:|.|        |..:.|:..:|.   |.||..:...:.|...
  Rat   322 QLVS---EAADSAKLCDSRGWDQEKP--------PTNKRHDREDLHKGQYGDSPSVLHPKPIKHQ 375

  Fly   347 RKDLAAGIY-----------------------QRFYSITNQSGYEMDLDSSETDSDLDGDHDDQH 388
            :....|..:                       ||.|..|          |.....:| ..|..||
  Rat   376 KTATRAKCFRCRRCGKTFSWAFHLADHQKVHTQRLYGCT----------SCPAVFNL-RKHFFQH 429

  Fly   389 KRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCR 453
             |:....|..:.|:.|::.|.|:..|..|| ..|: .:.|:.|..|...|.....|:.|  .:..
  Rat   430 -RKTHFAKTVFECQECRKLFNRRSSLIKHQ-AVHT-GEKPYKCNECGKAFNHFSTLKIH--QRIH 489

  Fly   454 NAQKRFLCHKCPLRFRWK------HNLKTHFREHRITNQTFECSECKRVFDKKKSLTVHLLSVHA 512
            :.:|.:.|.:|...|..:      |.:.:.||.|       :|..|.|.|.:...||.|.|| ||
  Rat   490 SGEKPYTCSECGKTFSRRTALTEHHRVHSGFRPH-------QCPVCPRRFSRPSHLTRHQLS-HA 546

  Fly   513 EESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFER 577
            .| :|..|..|...|...:.|.:|.|.|.::                    ....|:.|..||..
  Rat   547 AE-RLFGCAKCKETFGHKEQLERHYKSHTIE--------------------CSYECKQCGEHFIC 590

  Fly   578 IVDLRAHIQLELKLSLSLHQSYDSPHNY------------SITNESGFELQLEDSETEDEMQPGV 630
            ...|..|:.:.::.:.|  :.....|:.            ...|.|.:      .|..:::...|
  Rat   591 SSTLNCHLSIHIRENTS--EKVSGQHSQHTEKCFKNTKCGKAFNHSKY------PEQHEKIHAKV 647

  Fly   631 GSRPVYICEL--CSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTE 693
            .|     ||.  |...|.:..:.|..|.:....  .|::|.: ..||:..:.:..|   |.|.:|
  Rat   648 AS-----CEQSPCRNTCDQSMQPIHCQSSCAAV--KPNKCTE-PEKCIRNTSVSQH---QPSQSE 701

  Fly   694 KKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDR 758
            ....|..|:..|....:|..|.|:              ||     .||.        .:|..|||
  Rat   702 PPFKCNTCNRTFKQSAHLSNHQLI--------------HT-----TEKP--------FKCKECDR 739

  Fly   759 TYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEM 823
            .::..:.|..| :.:|         ::|.|.||.||.:....:.|..|.:.|:|:|||||..|..
  Rat   740 AFKHSNYLIQH-QKIH---------SVKDFECSECGKKFHQKSCLSKHQKIHSGQKPFKCADCGK 794

  Fly   824 AFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLK 888
            ||...::|..|:|:||||||:.|..|||.|::|..|..|:.||:|.||:.|:.|.|::.|..:.:
  Rat   795 AFIFSAQLIRHQRIHTGEKPYVCQECGKAFSQSSCLTLHLRTHTGEKPYTCSTCGKAFSQKANQR 859

  Fly   889 LHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDE 927
            .|.:.|:||.|..|..||:.|..|:.|.:|:  |.|..|
  Rat   860 KHERTHSGEKPCACDVCGKSFGFSTHLRQHQ--RIHTKE 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 6/20 (30%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..422 CDD:275368 7/20 (35%)
C2H2 Zn finger 431..447 CDD:275368 4/15 (27%)
C2H2 Zn finger 461..481 CDD:275368 6/25 (24%)
C2H2 Zn finger 490..511 CDD:275368 9/20 (45%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
C2H2 Zn finger 638..659 CDD:275368 6/22 (27%)
C2H2 Zn finger 668..690 CDD:275368 5/21 (24%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 34/71 (48%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
C2H2 Zn finger 846..866 CDD:275368 8/19 (42%)
C2H2 Zn finger 874..894 CDD:275368 5/19 (26%)
C2H2 Zn finger 902..924 CDD:275368 8/21 (38%)
Zfp473NP_001414640.1 None

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