DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Egr1

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_036683.2 Gene:Egr1 / 24330 RGDID:2544 Length:536 Species:Rattus norvegicus


Alignment Length:137 Identity:50/137 - (36%)
Similarity:68/137 - (49%) Gaps:13/137 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   743 ATEDGIPLLQCPHCDRTYQMK----SRLNNHIRDVHINGDRKRKEAIKRFLCSL--CGMETRSAA 801
            ||:.|...|:.  .:.|||.:    ||:..     :.|...|.....:.:.|.:  |......:.
  Rat   297 ATQSGSQDLKA--LNNTYQSQLIKPSRMRK-----YPNRPSKTPPHERPYACPVESCDRRFSRSD 354

  Fly   802 ALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTH 866
            .|..|:|.|||:|||:|.:|...|.|...|.:|.|.|||||||.|.:||:.|||||:.|||...|
  Rat   355 ELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 419

  Fly   867 SGLKPHK 873
            ...|..|
  Rat   420 LRQKDKK 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 668..690 CDD:275368
C2H2 Zn finger 698..715 CDD:275368
C2H2 Zn finger 753..774 CDD:275368 5/24 (21%)
C2H2 Zn finger 790..810 CDD:275368 5/21 (24%)
COG5048 814..>886 CDD:227381 31/60 (52%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
C2H2 Zn finger 846..866 CDD:275368 11/19 (58%)
C2H2 Zn finger 874..894 CDD:275368 50/137 (36%)
C2H2 Zn finger 902..924 CDD:275368
Egr1NP_036683.2 DUF3446 135..238 CDD:463400
zf-C2H2 339..363 CDD:395048 5/23 (22%)
C2H2 Zn finger 341..363 CDD:275368 5/21 (24%)
zf-H2C2_2 355..380 CDD:463886 12/24 (50%)
C2H2 Zn finger 371..391 CDD:275368 7/19 (37%)
zf-H2C2_2 383..408 CDD:463886 14/24 (58%)
C2H2 Zn finger 399..419 CDD:275368 11/19 (58%)
DUF3432 448..523 CDD:403204
Blue background indicates that the domain is not in the aligned region.

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