DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Gm4924

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_017169670.1 Gene:Gm4924 / 237412 MGIID:3643133 Length:1018 Species:Mus musculus


Alignment Length:971 Identity:238/971 - (24%)
Similarity:360/971 - (37%) Gaps:249/971 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DKLLSE----ILCELTEINLDATGSQKFPQCLCSGCTKKLMGAYCYVKQAMAAN-ELLMKHLKNG 89
            ||.||.    :.||..   |...||.|...|      .|....:.|::.....| |.|.::.:: 
Mouse   220 DKTLSSSSSLLGCEKI---LVGKGSDKSEPC------TKGFNHHRYLQTHKRTNSEDLYEYNQH- 274

  Fly    90 AAPTSTDCLQEAPMELCAEQHVEVKLETEDEDCGENDVTITCSELPEPDETDMESKKSVDPLTMI 154
                ..|....:.::|....|:|::|                       ..|.:|:|:      .
Mouse   275 ----DKDFRSNSSVKLHERTHLEIEL-----------------------YEDNQSEKA------F 306

  Fly   155 ETVKLEMEPRS---VEKPAYDDPTSDFEDEDSLDNLPLYNRI----------------------- 193
            .|..|...|||   .|:..||...:.|.   .|..|.::.||                       
Mouse   307 ATHSLHQVPRSHTREERYGYDQCGNTFA---CLSYLQIHERISLEKPFECNQCSKAFAYKRHLHR 368

  Fly   194 -QKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETRLYDCSLCIRKFSRSEALEAHLKIHR 257
             :|..||.|. |.|:.|.::|....:|:||: |.|..| :.|:|..|.:.|||:..|..|.:.|.
Mouse   369 HEKIHTGEKP-YGCNQCGKAFVYNSYLQRHK-RSHTGE-KPYECHQCGKAFSRNSHLYRHERSHT 430

  Fly   258 NSK------------RSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHP 310
            ..|            |::.:..|:::.    |..||:|     |..|...:.:.:.|:||...|.
Mouse   431 GEKPYGCNKCGKAFGRNSTLQRHERSH----NGEKPYG-----CNKCGKAFGRNSTLQRHERSHN 486

  Fly   311 DIVSLCGRPNMEPHELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFYSITNQSGYEMDLDSSE 375
                  |....|..:..:.|..:|.....|  :|..:        ::.|. .:|.|.....:|  
Mouse   487 ------GEKPYERKQCDKAFAQNSHLFHHE--VNCTQ--------EKSYG-CSQCGKAFAYNS-- 532

  Fly   376 TDSDLDGDHDDQHKRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVS 440
                |...|:..|...|     .|.|..|.:.|.:...|:.|:| ||: .:.|:...:||..|..
Mouse   533 ----LLQRHERSHTGEK-----PYECNKCGKAFSQNSHLHKHER-SHT-GEKPYGRKQCDKAFAQ 586

  Fly   441 LQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECSECKRVFDKKKSLTV 505
            ...|.|| |..| ..:|.:.|.:|...|.:..:|:.|.|.| ...:.:||::|.:.|.:...|..
Mouse   587 NSHLFHH-EINC-TQEKSYGCSQCGKAFAYNSHLQRHERSH-TGEKPYECNKCGKAFSQNSHLHK 648

  Fly   506 HLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRM 570
            |..| |..| |....:.|.:.|.::.:|.         .|:|...:           .|...|..
Mouse   649 HERS-HTGE-KPYGRKQCDKAFAQNSHLF---------HHEINCTQ-----------EKSYGCSQ 691

  Fly   571 CNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPV 635
            |...|.....|:.|                                 |.|.|        |.:| 
Mouse   692 CGKAFAYNSQLQRH---------------------------------ERSHT--------GEKP- 714

  Fly   636 YICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDH-HRQGQCSSTEKKHACG 699
            |.|..|.........:.:|:|. |..:| |:||..| .|..|::  .| |:..:..:.||.:...
Mouse   715 YECNKCGKAFGHYSNLQRHERN-HTGEK-PYECKKC-GKAFSQN--SHLHKHERSHTEEKPYGRK 774

  Fly   700 KCSYKFMWPENLEQHIL-LQHSKSSVSNPTGDRHTQGTG--DLEKDATEDGIPLLQCPHCDRTYQ 761
            :|...|.....|..|.. |...|....|.:|....|.:.  ..|.|.|::  ....|..|.:.:.
Mouse   775 QCDKDFAQKNLLHSHERNLSGQKPCEYNQSGKAFAQNSHLFHHEIDHTQE--KSYGCSQCGKAFA 837

  Fly   762 MKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFP 826
            ..|:|..|.|. | .|:       |.:.|:.||........|.:|.|.||||||::|..|..||.
Mouse   838 YNSQLQRHERS-H-TGE-------KPYGCNKCGKAFAQKNNLHSHERSHTGEKPYECKKCGKAFS 893

  Fly   827 RHSELASHRRMHTGEKP----------------FH------------CTVCGKDFARSDKLKRHM 863
            ::|.|..|.|.||||||                ||            |:.|||.|.|...|:||.
Mouse   894 QNSHLHKHERSHTGEKPYGRKQCDKAFAQNSHLFHHEINCTQEKSYGCSQCGKAFGRYSNLQRHE 958

  Fly   864 LTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRH 924
            .:|:|.||::|..|.|::.|...|..|.:.||||.|:.|..|.:.|...|.|.:|.  |||
Mouse   959 RSHTGEKPYECNKCGKAFSQNSHLHKHERSHTGEKPYECNQCLKAFACKSNLYRHE--RRH 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 7/20 (35%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..422 CDD:275368 6/20 (30%)
C2H2 Zn finger 431..447 CDD:275368 4/15 (27%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 6/20 (30%)
C2H2 Zn finger 520..540 CDD:275368 3/19 (16%)
C2H2 Zn finger 638..659 CDD:275368 4/20 (20%)
C2H2 Zn finger 668..690 CDD:275368 6/22 (27%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 35/99 (35%)
C2H2 Zn finger 818..838 CDD:275368 8/19 (42%)
C2H2 Zn finger 846..866 CDD:275368 9/19 (47%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 7/21 (33%)
Gm4924XP_017169670.1 KRAB 43..84 CDD:460171
C2H2 Zn finger 327..345 CDD:275368 4/20 (20%)
COG5048 349..756 CDD:227381 115/520 (22%)
C2H2 Zn finger 353..373 CDD:275368 1/19 (5%)
C2H2 Zn finger 381..401 CDD:275368 7/20 (35%)
C2H2 Zn finger 409..429 CDD:275368 7/19 (37%)
C2H2 Zn finger 437..457 CDD:275368 2/19 (11%)
C2H2 Zn finger 465..485 CDD:275368 5/19 (26%)
C2H2 Zn finger 493..509 CDD:275368 2/15 (13%)
C2H2 Zn finger 521..541 CDD:275368 5/25 (20%)
C2H2 Zn finger 549..569 CDD:275368 6/20 (30%)
C2H2 Zn finger 577..593 CDD:275368 4/15 (27%)
COG5048 599..1008 CDD:227381 127/489 (26%)
C2H2 Zn finger 605..625 CDD:275368 6/19 (32%)
C2H2 Zn finger 633..653 CDD:275368 6/20 (30%)
C2H2 Zn finger 661..677 CDD:275368 3/24 (13%)
C2H2 Zn finger 689..709 CDD:275368 6/52 (12%)
C2H2 Zn finger 717..737 CDD:275368 4/20 (20%)
C2H2 Zn finger 745..765 CDD:275368 6/22 (27%)
C2H2 Zn finger 773..791 CDD:275368 4/17 (24%)
C2H2 Zn finger 805..821 CDD:275368 3/15 (20%)
C2H2 Zn finger 829..849 CDD:275368 6/20 (30%)
C2H2 Zn finger 857..877 CDD:275368 6/19 (32%)
C2H2 Zn finger 885..905 CDD:275368 8/19 (42%)
C2H2 Zn finger 913..929 CDD:275368 1/15 (7%)
C2H2 Zn finger 941..961 CDD:275368 9/19 (47%)
C2H2 Zn finger 969..989 CDD:275368 6/19 (32%)
C2H2 Zn finger 997..1017 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

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