DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Gm4924

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_017169670.1 Gene:Gm4924 / 237412 MGIID:3643133 Length:1018 Species:Mus musculus


Alignment Length:971 Identity:238/971 - (24%)
Similarity:360/971 - (37%) Gaps:249/971 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DKLLSE----ILCELTEINLDATGSQKFPQCLCSGCTKKLMGAYCYVKQAMAAN-ELLMKHLKNG 89
            ||.||.    :.||..   |...||.|...|      .|....:.|::.....| |.|.::.:: 
Mouse   220 DKTLSSSSSLLGCEKI---LVGKGSDKSEPC------TKGFNHHRYLQTHKRTNSEDLYEYNQH- 274

  Fly    90 AAPTSTDCLQEAPMELCAEQHVEVKLETEDEDCGENDVTITCSELPEPDETDMESKKSVDPLTMI 154
                ..|....:.::|....|:|::|                       ..|.:|:|:      .
Mouse   275 ----DKDFRSNSSVKLHERTHLEIEL-----------------------YEDNQSEKA------F 306

  Fly   155 ETVKLEMEPRS---VEKPAYDDPTSDFEDEDSLDNLPLYNRI----------------------- 193
            .|..|...|||   .|:..||...:.|.   .|..|.::.||                       
Mouse   307 ATHSLHQVPRSHTREERYGYDQCGNTFA---CLSYLQIHERISLEKPFECNQCSKAFAYKRHLHR 368

  Fly   194 -QKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETRLYDCSLCIRKFSRSEALEAHLKIHR 257
             :|..||.|. |.|:.|.::|....:|:||: |.|..| :.|:|..|.:.|||:..|..|.:.|.
Mouse   369 HEKIHTGEKP-YGCNQCGKAFVYNSYLQRHK-RSHTGE-KPYECHQCGKAFSRNSHLYRHERSHT 430

  Fly   258 NSK------------RSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHP 310
            ..|            |::.:..|:::.    |..||:|     |..|...:.:.:.|:||...|.
Mouse   431 GEKPYGCNKCGKAFGRNSTLQRHERSH----NGEKPYG-----CNKCGKAFGRNSTLQRHERSHN 486

  Fly   311 DIVSLCGRPNMEPHELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFYSITNQSGYEMDLDSSE 375
                  |....|..:..:.|..:|.....|  :|..:        ::.|. .:|.|.....:|  
Mouse   487 ------GEKPYERKQCDKAFAQNSHLFHHE--VNCTQ--------EKSYG-CSQCGKAFAYNS-- 532

  Fly   376 TDSDLDGDHDDQHKRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVS 440
                |...|:..|...|     .|.|..|.:.|.:...|:.|:| ||: .:.|:...:||..|..
Mouse   533 ----LLQRHERSHTGEK-----PYECNKCGKAFSQNSHLHKHER-SHT-GEKPYGRKQCDKAFAQ 586

  Fly   441 LQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECSECKRVFDKKKSLTV 505
            ...|.|| |..| ..:|.:.|.:|...|.:..:|:.|.|.| ...:.:||::|.:.|.:...|..
Mouse   587 NSHLFHH-EINC-TQEKSYGCSQCGKAFAYNSHLQRHERSH-TGEKPYECNKCGKAFSQNSHLHK 648

  Fly   506 HLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRM 570
            |..| |..| |....:.|.:.|.::.:|.         .|:|...:           .|...|..
Mouse   649 HERS-HTGE-KPYGRKQCDKAFAQNSHLF---------HHEINCTQ-----------EKSYGCSQ 691

  Fly   571 CNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPV 635
            |...|.....|:.|                                 |.|.|        |.:| 
Mouse   692 CGKAFAYNSQLQRH---------------------------------ERSHT--------GEKP- 714

  Fly   636 YICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDH-HRQGQCSSTEKKHACG 699
            |.|..|.........:.:|:|. |..:| |:||..| .|..|::  .| |:..:..:.||.:...
Mouse   715 YECNKCGKAFGHYSNLQRHERN-HTGEK-PYECKKC-GKAFSQN--SHLHKHERSHTEEKPYGRK 774

  Fly   700 KCSYKFMWPENLEQHIL-LQHSKSSVSNPTGDRHTQGTG--DLEKDATEDGIPLLQCPHCDRTYQ 761
            :|...|.....|..|.. |...|....|.:|....|.:.  ..|.|.|::  ....|..|.:.:.
Mouse   775 QCDKDFAQKNLLHSHERNLSGQKPCEYNQSGKAFAQNSHLFHHEIDHTQE--KSYGCSQCGKAFA 837

  Fly   762 MKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFP 826
            ..|:|..|.|. | .|:       |.:.|:.||........|.:|.|.||||||::|..|..||.
Mouse   838 YNSQLQRHERS-H-TGE-------KPYGCNKCGKAFAQKNNLHSHERSHTGEKPYECKKCGKAFS 893

  Fly   827 RHSELASHRRMHTGEKP----------------FH------------CTVCGKDFARSDKLKRHM 863
            ::|.|..|.|.||||||                ||            |:.|||.|.|...|:||.
Mouse   894 QNSHLHKHERSHTGEKPYGRKQCDKAFAQNSHLFHHEINCTQEKSYGCSQCGKAFGRYSNLQRHE 958

  Fly   864 LTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRH 924
            .:|:|.||::|..|.|::.|...|..|.:.||||.|:.|..|.:.|...|.|.:|.  |||
Mouse   959 RSHTGEKPYECNKCGKAFSQNSHLHKHERSHTGEKPYECNQCLKAFACKSNLYRHE--RRH 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071 16/58 (28%)
C2H2 Zn finger 206..227 CDD:275368 7/20 (35%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..422 CDD:275368 6/20 (30%)
C2H2 Zn finger 431..447 CDD:275368 4/15 (27%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 6/20 (30%)
C2H2 Zn finger 520..540 CDD:275368 3/19 (16%)
C2H2 Zn finger 638..659 CDD:275368 4/20 (20%)
C2H2 Zn finger 668..690 CDD:275368 6/22 (27%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
zf-H2C2_2 802..825 CDD:290200 11/22 (50%)
COG5048 814..>886 CDD:227381 35/99 (35%)
C2H2 Zn finger 818..838 CDD:275368 8/19 (42%)
zf-H2C2_2 830..855 CDD:290200 16/52 (31%)
C2H2 Zn finger 846..866 CDD:275368 9/19 (47%)
zf-H2C2_2 859..883 CDD:290200 10/23 (43%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 7/21 (33%)
Gm4924XP_017169670.1 KRAB 43..84 CDD:366587
C2H2 Zn finger 327..345 CDD:275368 4/20 (20%)
COG5048 349..756 CDD:227381 115/520 (22%)
C2H2 Zn finger 353..373 CDD:275368 1/19 (5%)
C2H2 Zn finger 381..401 CDD:275368 7/20 (35%)
C2H2 Zn finger 409..429 CDD:275368 7/19 (37%)
C2H2 Zn finger 437..457 CDD:275368 2/19 (11%)
C2H2 Zn finger 465..485 CDD:275368 5/19 (26%)
C2H2 Zn finger 493..509 CDD:275368 2/15 (13%)
C2H2 Zn finger 521..541 CDD:275368 5/25 (20%)
C2H2 Zn finger 549..569 CDD:275368 6/20 (30%)
C2H2 Zn finger 577..593 CDD:275368 4/15 (27%)
COG5048 599..1008 CDD:227381 127/489 (26%)
C2H2 Zn finger 605..625 CDD:275368 6/19 (32%)
C2H2 Zn finger 633..653 CDD:275368 6/20 (30%)
C2H2 Zn finger 661..677 CDD:275368 3/24 (13%)
C2H2 Zn finger 689..709 CDD:275368 6/52 (12%)
C2H2 Zn finger 717..737 CDD:275368 4/20 (20%)
C2H2 Zn finger 745..765 CDD:275368 6/22 (27%)
C2H2 Zn finger 773..791 CDD:275368 4/17 (24%)
C2H2 Zn finger 805..821 CDD:275368 3/15 (20%)
C2H2 Zn finger 829..849 CDD:275368 6/20 (30%)
C2H2 Zn finger 857..877 CDD:275368 6/19 (32%)
C2H2 Zn finger 885..905 CDD:275368 8/19 (42%)
C2H2 Zn finger 913..929 CDD:275368 1/15 (7%)
C2H2 Zn finger 941..961 CDD:275368 9/19 (47%)
C2H2 Zn finger 969..989 CDD:275368 6/19 (32%)
C2H2 Zn finger 997..1017 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833398
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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