DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and IKZF3

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_036613.2 Gene:IKZF3 / 22806 HGNCID:13178 Length:509 Species:Homo sapiens


Alignment Length:149 Identity:54/149 - (36%)
Similarity:80/149 - (53%) Gaps:17/149 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   765 RLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHS 829
            :|..|:    ::.|..|..:.| ..|.:||:...|...|:.|.|.||||:||:|:.|..:|.:..
Human   100 KLERHV----VSFDSSRPTSGK-MNCDVCGLSCISFNVLMVHKRSHTGERPFQCNQCGASFTQKG 159

  Fly   830 ELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQH 894
            .|..|.::|||||||.|.:|.....|.|.|..|:.|||..||:||.:|.:||:|...|:.|.:: 
Human   160 NLLRHIKLHTGEKPFKCHLCNYACQRRDALTGHLRTHSVEKPYKCEFCGRSYKQRSSLEEHKER- 223

  Fly   895 TGECPFVCGTCGERFIQSS 913
                   |.|    |:||:
Human   224 -------CRT----FLQST 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 668..690 CDD:275368
C2H2 Zn finger 698..715 CDD:275368
C2H2 Zn finger 753..774 CDD:275368 2/8 (25%)
C2H2 Zn finger 790..810 CDD:275368 7/19 (37%)
zf-H2C2_2 802..825 CDD:290200 11/22 (50%)
COG5048 814..>886 CDD:227381 31/71 (44%)
C2H2 Zn finger 818..838 CDD:275368 5/19 (26%)
zf-H2C2_2 830..855 CDD:290200 11/24 (46%)
C2H2 Zn finger 846..866 CDD:275368 6/19 (32%)
zf-H2C2_2 859..883 CDD:290200 12/23 (52%)
C2H2 Zn finger 874..894 CDD:275368 7/19 (37%)
C2H2 Zn finger 902..924 CDD:275368 5/12 (42%)
IKZF3NP_036613.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..86
COG5048 <79..>219 CDD:227381 48/123 (39%)
C2H2 Zn finger 120..140 CDD:275368 7/19 (37%)
zf-H2C2_2 133..157 CDD:316026 12/23 (52%)
C2H2 Zn finger 148..168 CDD:275368 5/19 (26%)
C2H2 Zn finger 176..196 CDD:275368 6/19 (32%)
C2H2 Zn finger 204..220 CDD:275368 6/15 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..394
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.