DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and Zfp40

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_033581.2 Gene:Zfp40 / 22700 MGIID:99185 Length:796 Species:Mus musculus


Alignment Length:892 Identity:211/892 - (23%)
Similarity:331/892 - (37%) Gaps:229/892 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 KNGAAPTSTDCLQEAPMELCAEQHVEVKLETEDED-----------------------------C 122
            :.||.......|.:.|.:|...::|.|....|:.:                             |
Mouse    24 QKGATGKMAASLIDVPQDLLTFRNVAVDFSKEEWEYLNSSQRALYMDVMWENYSNLVFVENHCIC 88

  Fly   123 GENDVTITCSELPEPDETDMESKKSVDPLTMIETVKLEMEPRSVEKPAYDDPTS-DFEDEDSLDN 186
            |:.:           ::.|..|...:.....||  :...:...::|..|:...| .:...|:.:|
Mouse    89 GKYE-----------EDMDQSSNHIIYQHANIE--EKSYKYHELDKMLYESSQSTPYNTSDTTEN 140

  Fly   187 LPLYNRIQKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPET----RLYDCSLC--IRKFSR 245
            ..:|....:|....:|:.              ||.|:.|..:.|.    |.| .:||  |..:::
Mouse   141 CKMYGSDNQWDPSNESLN--------------LKAHKSRSTEEEEYKDYREY-LNLCSIIGSYTQ 190

  Fly   246 SEALEAHLKIHRNSKRSANISEH-----KKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRH 305
            .:          ..|:...|:||     .|.|.:...:|.  |.|..:|..|...:...:.|.||
Mouse   191 MD----------TRKKEHKITEHDKFFDSKHKLMIKRMCS--GEKPYQCRKCGKCFRTYSSLYRH 243

  Fly   306 LEEHPDIVSLCGRPNMEPHELAE----LFYPDSKDLSEEQLINLIR------KDLAAGIYQRFYS 360
            ...|         |..:|::|.|    :.|     ||..::...|.      |.:..|  :.:|.
Mouse   244 RRTH---------PGEKPYKLTECNKSILY-----LSHHKVHYNIHYGEKPYKCIECG--KCYYH 292

  Fly   361 ITNQSGYEMDLDSSETDSDLDGDHDDQH------KRRKK--SRKATYSCELCQQKFPRKYQLYDH 417
            .:.:..|.:   .||.:|....|.....      ||..|  ..:..|.|:.|.:.|.....|.:|
Mouse   293 SSFEKHYRI---HSEEESYKCNDCRKSFICCLGLKRHHKIHGGERPYECKQCSKSFYTSSHLENH 354

  Fly   418 QRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHR 482
            .|....   ..|.|..|.....|...|:.|  .:....:|.::|.:|...|..|..||||.|.| 
Mouse   355 YRTHRR---KLHRCNECGKSLSSSSGLQRH--QRIHRGEKAYICAECNKCFIQKSQLKTHQRIH- 413

  Fly   483 ITNQTFECSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDI 547
            ...::::||||::.|....||.:| ..:|..| |...|..|.:.|.:..:|.:|.|.|       
Mouse   414 TGEKSYKCSECEKSFTVGSSLRIH-QRIHTGE-KPYKCSECHKCFIQQAHLRRHQKIH------- 469

  Fly   548 PLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESG 612
                         .|.|...|..|...|....|||.|.::.                        
Mouse   470 -------------TGEKPYKCSECEKSFTVGSDLRMHQKIH------------------------ 497

  Fly   613 FELQLEDSETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVS 677
                             .|.:| |.|..|.....:|.::.:||| :|..:| |::|.:| .||.:
Mouse   498 -----------------TGEKP-YKCSDCDKCFIQKAKLKKHQR-IHTGEK-PYKCSEC-EKCFT 541

  Fly   678 KSIMDHHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKD 742
             .:.|.....:..:.||.:.|.:|...|:...||.:|                 |...||  ||.
Mouse   542 -VVSDLRTHQKIHTGEKPYKCSECDKCFIRKANLRRH-----------------HRIHTG--EKP 586

  Fly   743 ATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHM 807
                    .:|..|.:.:..|:.|..|.| :| .|:       |.:.|. ||......:.|..|.
Mouse   587 --------YKCSDCGKCFIQKANLRTHER-IH-TGE-------KPYKCE-CGKSFTVGSDLRKHQ 633

  Fly   808 RRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPH 872
            :.||||||:||..|...|.|.:.|..|:|:||||||:.|:.|||.|.:...|:.|...|:|.||:
Mouse   634 KCHTGEKPYKCSECNKCFIRKAHLRRHQRIHTGEKPYKCSDCGKCFIQKANLRTHQKIHTGEKPY 698

  Fly   873 KCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHR 919
            ||:.|:|.:.|...|:.|.:.||||.|:.|..|.:.|...|.|.||:
Mouse   699 KCSECDKCFIQKDHLRTHQRLHTGEKPYKCSECEKSFTGGSVLRKHQ 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 4/20 (20%)
C2H2 Zn finger 236..256 CDD:275368 3/21 (14%)
C2H2 Zn finger 401..422 CDD:275368 6/20 (30%)
C2H2 Zn finger 431..447 CDD:275368 4/15 (27%)
C2H2 Zn finger 461..481 CDD:275368 9/19 (47%)
C2H2 Zn finger 490..511 CDD:275368 8/20 (40%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
C2H2 Zn finger 638..659 CDD:275368 6/20 (30%)
C2H2 Zn finger 668..690 CDD:275368 5/21 (24%)
C2H2 Zn finger 698..715 CDD:275368 5/16 (31%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 5/19 (26%)
COG5048 814..>886 CDD:227381 32/71 (45%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
C2H2 Zn finger 846..866 CDD:275368 7/19 (37%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 7/18 (39%)
Zfp40NP_033581.2 KRAB 42..82 CDD:460171 4/39 (10%)
C2H2 Zn finger 227..247 CDD:275368 5/19 (26%)
C2H2 Zn finger 255..275 CDD:275368 5/24 (21%)
COG5048 279..677 CDD:227381 128/513 (25%)
C2H2 Zn finger 283..302 CDD:275368 3/23 (13%)
C2H2 Zn finger 310..330 CDD:275368 4/19 (21%)
C2H2 Zn finger 338..358 CDD:275368 6/19 (32%)
C2H2 Zn finger 365..385 CDD:275368 5/21 (24%)
C2H2 Zn finger 393..413 CDD:275368 9/19 (47%)
C2H2 Zn finger 421..441 CDD:275368 8/20 (40%)
C2H2 Zn finger 449..469 CDD:275368 6/19 (32%)
C2H2 Zn finger 477..497 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..525 CDD:275368 6/20 (30%)
C2H2 Zn finger 533..553 CDD:275368 5/21 (24%)
C2H2 Zn finger 561..581 CDD:275368 7/36 (19%)
C2H2 Zn finger 589..609 CDD:275368 6/20 (30%)
C2H2 Zn finger 618..636 CDD:275368 4/18 (22%)
C2H2 Zn finger 644..664 CDD:275368 7/19 (37%)
C2H2 Zn finger 672..692 CDD:275368 7/19 (37%)
zf-H2C2_2 684..709 CDD:463886 10/24 (42%)
C2H2 Zn finger 700..720 CDD:275368 6/19 (32%)
zf-H2C2_2 712..736 CDD:463886 9/23 (39%)
C2H2 Zn finger 728..748 CDD:275368 7/18 (39%)

Return to query results.
Submit another query.