DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and znf-782

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:388 Identity:99/388 - (25%)
Similarity:158/388 - (40%) Gaps:59/388 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   586 QLELKLSLSLHQSYDSPHNYSITNES-----GFELQLEDSETEDEMQPGVGSRPVYICELCSVQC 645
            :||...|.|...|..|||..|.:|.|     ..::|.....:.....|.......:||.:|. :.
 Worm    49 ELENSDSASSLVSAGSPHGSSSSNGSHGSSPPLQVQSPSQGSGSSGSPTGQPEKRHICTVCG-KG 112

  Fly   646 KRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEKKHACGKCSYKFMWPEN 710
            ...|.:::..:..|..:| |:.|..|......|:.:..|.  :..:.|:.:.|..|...|     
 Worm   113 FSYFSILESHKRSHTGEK-PYNCHFCQKTFAQKATLQVHE--RTHTGERPYKCRYCEKTF----- 169

  Fly   711 LEQHILLQHSKSS---VSN---PTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNH 769
            .:......|.||:   :.|   |..|:.......|.......|....:|..|.:|:.:|:.|..|
 Worm   170 AQYGTKTVHEKSAHLGIRNYKCPKCDKLLSSPSALYTHKKTHGDKTFRCDFCPKTFALKNYLKLH 234

  Fly   770 IRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASH 834
            ::.||...:||.       :|..|......|.:|..|:|.||||:|:.|..|..||.....|.||
 Worm   235 VKQVHEQNERKH-------VCVYCNKGFAYAGSLQVHVRTHTGERPYVCKFCPKAFASQGNLQSH 292

  Fly   835 RRMHTGEKPFHCTVCGKDFARSDKLKRHMLTH-------------SGLKP-------------HK 873
            .|.||||:|:.|..|.:.|.:..:|..|..||             :.:.|             ::
 Worm   293 ERTHTGERPYSCQFCQRTFIQKSQLTAHESTHLTQKHSVNPDSTTADILPVAGSVTDHQMVGNYE 357

  Fly   874 CTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEVEAWLRRQK 936
            ||:|.|.|..|..|.:|:::||.:..:.|..||:.:.|..:|..|:      |:.||:..|.|
 Worm   358 CTFCNKKYPYASSLYIHMRKHTEKSAYSCDGCGKPYSQKISLNIHQ------DQCEAFKNRLK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368 3/20 (15%)
C2H2 Zn finger 668..690 CDD:275368 4/21 (19%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
zf-H2C2_2 802..825 CDD:290200 10/22 (45%)
COG5048 814..>886 CDD:227381 28/97 (29%)
C2H2 Zn finger 818..838 CDD:275368 8/19 (42%)
zf-H2C2_2 830..855 CDD:290200 12/24 (50%)
C2H2 Zn finger 846..866 CDD:275368 5/19 (26%)
zf-H2C2_2 859..883 CDD:290200 10/49 (20%)
C2H2 Zn finger 874..894 CDD:275368 8/19 (42%)
C2H2 Zn finger 902..924 CDD:275368 6/21 (29%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 3/20 (15%)
zf-H2C2_2 119..143 CDD:290200 5/24 (21%)
C2H2 Zn finger 134..154 CDD:275368 4/21 (19%)
zf-H2C2_2 147..171 CDD:290200 5/30 (17%)
C2H2 Zn finger 162..180 CDD:275368 4/22 (18%)
COG5048 <187..404 CDD:227381 63/229 (28%)
C2H2 Zn finger 191..211 CDD:275370 3/19 (16%)
C2H2 Zn finger 218..239 CDD:275368 6/20 (30%)
C2H2 Zn finger 248..268 CDD:275368 6/19 (32%)
zf-H2C2_2 260..285 CDD:290200 12/24 (50%)
C2H2 Zn finger 276..296 CDD:275368 8/19 (42%)
zf-H2C2_2 288..313 CDD:290200 12/24 (50%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 386..403 CDD:275368 5/16 (31%)
C2H2 Zn finger 424..441 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.