DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and LOC1276170

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_315481.4 Gene:LOC1276170 / 1276170 VectorBaseID:AGAMI1_000612 Length:526 Species:Anopheles gambiae


Alignment Length:714 Identity:136/714 - (19%)
Similarity:210/714 - (29%) Gaps:292/714 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 CSLCIRKFS--------RSEALEAHLK--IHRNSKRSANISEHKKAKAVDLNLCKP-----HGYK 285
            |.||:...|        |....:..||  .|.:......:.||.      .|.|:.     |.| 
Mosquito    46 CRLCLGSLSSTGPKISIRDAEFQEELKTVFHFDIILDTALPEHV------CNECRSTVSYCHSY- 103

  Fly   286 LIECMICQSQYNKIADLRRHLEEHPDIVSLCGRPN---MEPHE---LAELFYPDSKDLSEEQLIN 344
               |:  |.|.|:.              .|.|..|   ::|.|   :..|...|....:|:.|  
Mosquito   104 ---CL--QVQANQF--------------QLLGEANENVLKPVENVMVESLVEEDDCTKTEKHL-- 147

  Fly   345 LIRKDLAAGIYQRFYSITNQSGYEMDLDSSETDSDLDGDHDDQHKRRKKSRK------------- 396
              :|:..|...:....:.::.|..:|.|.      :.|.:|.|.:|.::|.|             
Mosquito   148 --QKEELAVNQEATMCLEDREGLSVDEDC------VRGKNDKQRRRARQSIKNKPDLQKETENQD 204

  Fly   397 ---------------------ATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVS 440
                                 .|..||:|........||.||.|.:|........||        
Mosquito   205 TSSKEVSQANQLENDKIITQFFTLECEICAATAESFVQLLDHYRTAHKTKGYVRCCG-------- 261

  Fly   441 LQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECSECKRVFDKKKSLTV 505
                            |:|        || ::.|..|...||   .|..|..|.:.:..|:.|.:
Mosquito   262 ----------------KQF--------FR-RYILVDHIAAHR---GTIRCEICHKTYKTKRYLAL 298

  Fly   506 HLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRM 570
            |....|:.|                                          |.||     ..|..
Mosquito   299 HFAKSHSGE------------------------------------------TDRP-----FKCGK 316

  Fly   571 CNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPV 635
            |::.:.:...||||..:.::                                          :..
Mosquito   317 CHVSYPKQYLLRAHELMHVQ------------------------------------------QQC 339

  Fly   636 YICE--LCSVQCKRKFEMIQHQRTMHRFDKMPHECDDC--IFKCVSKSIMDHHRQGQCSSTEKKH 696
            :|||  |.:.|..|     .|...||..|. .|.||.|  :|:  :|..|:.|            
Mosquito   340 HICEKVLSNTQSLR-----VHIAQMHGGDG-HHICDTCGKVFR--TKPAMERH------------ 384

  Fly   697 ACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQ 761
                          :.:|:                   |...:|:         |||.||.:.:.
Mosquito   385 --------------INEHM-------------------GVDVVER---------LQCDHCQKWFS 407

  Fly   762 MKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFP 826
            .|..|..|:|.:|:.|.:.       |.|.||..|:.::.||..|..|...|:.|:|:.|...|.
Mosquito   408 GKYNLRKHVRFMHLEGGQV-------FRCELCPHESPNSRALANHKLRVHVEERFECEYCGKRFK 465

  Fly   827 RHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLH 890
            |...|..|...||....:.|.:|..   |:...|.:..||...|..:....:|..|..:::..|
Mosquito   466 RRPNLREHIASHTNMPLYSCEICQN---RTFNSKANYFTHRKHKHPQEWEAQKRLRTEREMSKH 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368 7/29 (24%)
C2H2 Zn finger 401..422 CDD:275368 8/20 (40%)
C2H2 Zn finger 431..447 CDD:275368 2/15 (13%)
C2H2 Zn finger 461..481 CDD:275368 4/19 (21%)
C2H2 Zn finger 490..511 CDD:275368 5/20 (25%)
C2H2 Zn finger 520..540 CDD:275368 0/19 (0%)
C2H2 Zn finger 638..659 CDD:275368 6/22 (27%)
C2H2 Zn finger 668..690 CDD:275368 7/23 (30%)
C2H2 Zn finger 698..715 CDD:275368 0/16 (0%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 7/19 (37%)
COG5048 814..>886 CDD:227381 18/71 (25%)
C2H2 Zn finger 818..838 CDD:275368 6/19 (32%)
C2H2 Zn finger 846..866 CDD:275368 4/19 (21%)
C2H2 Zn finger 874..894 CDD:275368 3/17 (18%)
C2H2 Zn finger 902..924 CDD:275368
LOC1276170XP_315481.4 None
Blue background indicates that the domain is not in the aligned region.

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