DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and znf649

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_004919616.1 Gene:znf649 / 101731232 XenbaseID:XB-GENE-29085199 Length:1375 Species:Xenopus tropicalis


Alignment Length:331 Identity:73/331 - (22%)
Similarity:112/331 - (33%) Gaps:101/331 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1370 GRVTIEEV-LDSIFQ--KVTPTNQRLNFD-----------RSYPQADELF---------QGNVDG 1411
            ||:..|:: ..|.:.  :.||...||:.|           :.|.|.|..|         ||.:..
 Frog   286 GRIANEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQGAISR 350

  Fly  1412 P---GIYTNNYSV----------------MRQVLKSPERAEHILQNEELFVRCTECHRTRELS-- 1455
            .   |.|..:|.:                ..:|.::...|..::.|:......|...|.|..:  
 Frog   351 ETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWH 415

  Fly  1456 ---AARLFFVSCKHCYTYYCSRECRHNNWPNHSGRCSFARINTLCKDVIMKVREDEQAQAFMSKV 1517
               |.||....            ||..:.|     ||    |.|  .::..:..|.|..|     
 Frog   416 SGIALRLELFG------------CRVTDAP-----CS----NML--GMLSGLIADSQISA----- 452

  Fly  1518 ARDGFSVSGRGSVNIRLSSPQLAQAYVS-NGW--RALSAYPNDQLLYY-----YTVKALIAE--R 1572
                      .|....|.||..|:...| :||  |...|.|.::.|..     .|||.:|.:  |
 Frog   453 ----------SSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGAR 507

  Fly  1573 KEPSLIALCNRYEPREKFILSVSIIA-DIEHC--PETPPPETRELSAVQFSSPR-SRYEAIQNQN 1633
            ...|:.|:..|...| ||.:|.|:.. |.|:.  |.|..|:..| ..:.:.:|. .|::.|..|.
 Frog   508 GGDSITAVEARAFVR-KFKVSYSLNGKDWEYIQDPRTQQPKLFE-GNMHYDTPDIRRFDPIPAQY 570

  Fly  1634 APYFSE 1639
            ...:.|
 Frog   571 VRVYPE 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 668..690 CDD:275368
C2H2 Zn finger 698..715 CDD:275368
C2H2 Zn finger 753..774 CDD:275368
C2H2 Zn finger 790..810 CDD:275368
COG5048 814..>886 CDD:227381
C2H2 Zn finger 818..838 CDD:275368
C2H2 Zn finger 846..866 CDD:275368
C2H2 Zn finger 874..894 CDD:275368
C2H2 Zn finger 902..924 CDD:275368
znf649XP_004919616.1 C2H2 Zn finger 950..970 CDD:275368
C2H2 Zn finger 1021..1041 CDD:275368
C2H2 Zn finger 1049..1069 CDD:275368
C2H2 Zn finger 1077..1097 CDD:275368
C2H2 Zn finger 1166..1186 CDD:275368
C2H2 Zn finger 1194..1214 CDD:275368
C2H2 Zn finger 1222..1242 CDD:275368
C2H2 Zn finger 1250..1270 CDD:275368
C2H2 Zn finger 1278..1298 CDD:275368
C2H2 Zn finger 1306..1325 CDD:275368
KRAB 13..72 CDD:214630
COG5048 <128..290 CDD:227381 2/3 (67%)
C2H2 Zn finger 132..152 CDD:275368
C2H2 Zn finger 160..180 CDD:275368
C2H2 Zn finger 188..208 CDD:275368
COG5048 212..604 CDD:227381 73/331 (22%)
C2H2 Zn finger 216..236 CDD:275368
C2H2 Zn finger 244..264 CDD:275368
C2H2 Zn finger 272..292 CDD:275368 2/5 (40%)
C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
C2H2 Zn finger 354..374 CDD:275368 3/19 (16%)
C2H2 Zn finger 382..402 CDD:275368 3/19 (16%)
C2H2 Zn finger 410..430 CDD:275368 6/31 (19%)
C2H2 Zn finger 438..458 CDD:275368 5/36 (14%)
C2H2 Zn finger 466..486 CDD:275368 6/19 (32%)
C2H2 Zn finger 494..514 CDD:275368 6/19 (32%)
C2H2 Zn finger 533..553 CDD:275368 6/20 (30%)
C2H2 Zn finger 560..580 CDD:275368 4/17 (24%)
COG5048 584..975 CDD:227381
C2H2 Zn finger 588..608 CDD:275368
C2H2 Zn finger 616..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 672..692 CDD:275368
C2H2 Zn finger 700..720 CDD:275368
C2H2 Zn finger 728..748 CDD:275368
C2H2 Zn finger 782..802 CDD:275368
C2H2 Zn finger 810..830 CDD:275368
C2H2 Zn finger 838..858 CDD:275368
C2H2 Zn finger 866..886 CDD:275368
COG5048 890..1315 CDD:227381
C2H2 Zn finger 894..914 CDD:275368
C2H2 Zn finger 922..942 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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