DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and si:ch73-347e22.4

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_003200604.2 Gene:si:ch73-347e22.4 / 100536830 ZFINID:ZDB-GENE-140106-269 Length:2461 Species:Danio rerio


Alignment Length:1021 Identity:199/1021 - (19%)
Similarity:333/1021 - (32%) Gaps:288/1021 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PVICRTCDSTDTDNL-LKLATPSKK----------YPDKLLSEILCELTEINLDATGSQKFPQCL 57
            |:....|:..:|:.. .|...|.||          ..|...|.:  |::|.:.....::|.....
Zfish  1404 PMQTTDCEDHNTEKRPRKRGRPPKKNNKNMVFVAHLEDNPSSSV--EISEFSSSQDSTEKTVNVA 1466

  Fly    58 CSGCTKK-----LMGAYCYVKQAMAANELLMKHLKNGAAPTS---TDCL-QEAPM-ELCAEQHVE 112
            .|...:|     .||....|:.::..   :.|.|.|..:.:|   ||.| |::|. :...|:::|
Zfish  1467 ESSVMQKDVEFLKMGKVVEVENSVVR---VTKQLGNDPSDSSRSTTDPLSQDSPSPKRKKEKNIE 1528

  Fly   113 VKL------------------ETEDEDCGENDVTITCSE----LPEPDETDMESKKSVDPLT--- 152
            ..:                  :.:.....:|...:...|    ||.|...  |:.|..:..|   
Zfish  1529 KPIRNLRVSSRLYEMSLKDSQKADKPSLSQNATEVFNREGKTSLPMPGVA--ENLKLCEKTTVQD 1591

  Fly   153 -MIETVKLEMEPRSVEK-------------PAYDD-----PTSDFEDE-------DSLDNLPLYN 191
             |:..:|:|.:...|.|             |:.|.     ||...:..       .|..::..|.
Zfish  1592 GMLANIKIENKATKVVKRRNRGRKRDRIKAPSLDQRLKSKPTEIVKKPLTCKYCGISFRHITAYT 1656

  Fly   192 RIQKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETRLYDCSLCIRKFSRSEALEAHLKIH 256
            ..::..||.|. |||..|.::|.:...||.|.: .|..:|. :.|..|..:|.:.|.|..|.|:|
Zfish  1657 IHRRIHTGDKP-YKCKICGKTFAQLSKLKSHHI-AHTQDTS-FPCPCCNHRFMQKEDLLCHFKVH 1718

  Fly   257 -RNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEH----PDIVSLC 316
             :.||.::...:..::|...|:...........|:||:..:.....|:.|::.|    |.....|
Zfish  1719 LKESKANSEPQKDLRSKRNALSNESSEAANNYRCLICKKNFVNQDKLQIHMQTHEMEKPLSCKDC 1783

  Fly   317 GRPNMEPHELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFYSITNQSGYEMDLDSSETDSDLD 381
            |:....|..|..                                                     
Zfish  1784 GKNFWNPSSLTA----------------------------------------------------- 1795

  Fly   382 GDHDDQHKRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRH 446
              |:..|...|     .|:|.:|.:.|.:...|..|. |:|: .:.|..|..|...|..|..||.
Zfish  1796 --HEKTHWPVK-----PYACSICGKGFNQLRALKKHS-QNHA-GETPFSCFHCSHAFSDLSALRM 1851

  Fly   447 HNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQT-----FECSECKRVFDKKKSLTVH 506
            |..|:...|:|....:.         |::.......:..|.     |:|..||::|.|       
Zfish  1852 HQASKTCIARKNVEANS---------NIEGFIVSQGVDGQVNTPVFFKCQICKQLFRK------- 1900

  Fly   507 LLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRMC 571
                           ||       .|.: ||:.|                ||.|    ...|..|
Zfish  1901 ---------------WC-------QYTL-HLQTH----------------TSSP----PYICFSC 1922

  Fly   572 NLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPVY 636
            ...:|...::..|.::          ...|.....|...|..|: .|......:..|..|:|.  
Zfish  1923 GQCYETDSEMNVHCEV----------CCQSSGEDKICGTSLSEI-TEGVSRSPQSLPSTGTRQ-- 1974

  Fly   637 ICELCSVQCKRKFEMIQH--QRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEK----- 694
                 :.|.:...|.:..  ||......|:|..........:.::.:....:...:||..     
Zfish  1975 -----NSQKQTSSEQLAEPVQRNNKVLKKLPETITIQSPITLPRNQLPAPSEAISASTSSSPSLW 2034

  Fly   695 KHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPHCDRT 759
            .:.|.:|..:|...::|..|:        .::..|.|:|                   |.||.:.
Zfish  2035 NYKCSRCGQRFKQYKSLSVHL--------QTHAAGFRYT-------------------CTHCGQF 2072

  Fly   760 YQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMA 824
            ::..|:|..|        .|:.:...:.|.||.|.::.|..::...||..|.|..|:.|.||...
Zfish  2073 FESWSKLWLH--------QRRHRLKSRGFSCSQCNLQFRFFSSFKEHMIAHAGHSPYVCTLCPKT 2129

  Fly   825 FPRHSELASHRRM-HTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLK 888
            |...:.|.:|:.: |.......|.||.|.|:....|.:|.|.|:|...|.|..|...:..::.||
Zfish  2130 FTEEASLHAHQCVSHNLRTSLKCDVCSKTFSNLSNLIKHSLLHNGSTSHICLSCNLPFTNSRVLK 2194

  Fly   889 LHLQQHTG--------------ECPFVCGTCGERFIQSSTLEKHRL 920
            .||:.||.              ..|..|..|...|.....|..|::
Zfish  2195 EHLKTHTTGPGPALPDIPLKPLSFPHKCKKCKASFSTGDLLYAHQI 2240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 6/20 (30%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..422 CDD:275368 6/20 (30%)
C2H2 Zn finger 431..447 CDD:275368 6/15 (40%)
C2H2 Zn finger 461..481 CDD:275368 1/19 (5%)
C2H2 Zn finger 490..511 CDD:275368 5/20 (25%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 638..659 CDD:275368 4/22 (18%)
C2H2 Zn finger 668..690 CDD:275368 0/21 (0%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 21/72 (29%)
C2H2 Zn finger 818..838 CDD:275368 6/20 (30%)
C2H2 Zn finger 846..866 CDD:275368 8/19 (42%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 5/19 (26%)
si:ch73-347e22.4XP_003200604.2 C2H2 Zn finger 1642..1662 CDD:275368 2/19 (11%)
zf-H2C2_2 1658..1679 CDD:463886 8/21 (38%)
C2H2 Zn finger 1670..1690 CDD:275368 6/20 (30%)
C2H2 Zn finger 1698..1718 CDD:275368 7/19 (37%)
zf-C2H2 1750..1772 CDD:395048 5/21 (24%)
C2H2 Zn finger 1752..1772 CDD:275368 5/19 (26%)
C2H2 Zn finger 1780..1800 CDD:275368 5/74 (7%)
C2H2 Zn finger 1808..1828 CDD:275368 6/20 (30%)
C2H2 Zn finger 1836..1853 CDD:275368 6/16 (38%)
C2H2 Zn finger 1891..1911 CDD:275368 10/49 (20%)
C2H2 Zn finger 1919..1935 CDD:275368 3/15 (20%)
C2H2 Zn finger 2038..2058 CDD:275368 5/27 (19%)
zf-C2H2_8 2041..2119 CDD:464935 23/112 (21%)
C2H2 Zn finger 2066..2086 CDD:275368 7/27 (26%)
C2H2 Zn finger 2095..2115 CDD:275368 6/19 (32%)
SUF4-like 2123..>2170 CDD:411020 14/46 (30%)
C2H2 Zn finger 2123..2144 CDD:411020 6/20 (30%)
C2H2 Zn finger 2123..2144 CDD:275368 6/20 (30%)
C2H2 Zn finger 2152..2172 CDD:275368 8/19 (42%)
C2H2 Zn finger 2152..2170 CDD:411020 7/17 (41%)
C2H2 Zn finger 2180..2200 CDD:275368 6/19 (32%)
C2H2 Zn finger 2222..2242 CDD:275368 5/19 (26%)

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