DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and ikzf3

DIOPT Version :9

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_031750661.1 Gene:ikzf3 / 100491406 XenbaseID:XB-GENE-994462 Length:377 Species:Xenopus tropicalis


Alignment Length:92 Identity:38/92 - (41%)
Similarity:53/92 - (57%) Gaps:6/92 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   812 GEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTY 876
            ||:||:|:.|..:|.:...|..|.::|||||||.|.:|.....|.|.|..|:.|||..||:||.:
 Frog    16 GERPFQCNQCGASFTQKGNLLRHGKLHTGEKPFKCHLCSYACQRRDALTGHLRTHSVEKPYKCEF 80

  Fly   877 CEKSYRQAKDLKLH------LQQHTGE 897
            |.:||:|...|:.|      .||:..|
 Frog    81 CGRSYKQRSSLEEHKERCRIYQQNLSE 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 668..690 CDD:275368
C2H2 Zn finger 698..715 CDD:275368
C2H2 Zn finger 753..774 CDD:275368
C2H2 Zn finger 790..810 CDD:275368
zf-H2C2_2 802..825 CDD:290200 6/12 (50%)
COG5048 814..>886 CDD:227381 31/71 (44%)
C2H2 Zn finger 818..838 CDD:275368 5/19 (26%)
zf-H2C2_2 830..855 CDD:290200 11/24 (46%)
C2H2 Zn finger 846..866 CDD:275368 6/19 (32%)
zf-H2C2_2 859..883 CDD:290200 12/23 (52%)
C2H2 Zn finger 874..894 CDD:275368 8/25 (32%)
C2H2 Zn finger 902..924 CDD:275368
ikzf3XP_031750661.1 COG5048 <19..153 CDD:227381 36/89 (40%)
C2H2 Zn finger 22..42 CDD:275368 5/19 (26%)
C2H2 Zn finger 50..70 CDD:275368 6/19 (32%)
C2H2 Zn finger 78..94 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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