DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and znf423

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_002937417.2 Gene:znf423 / 100491000 XenbaseID:XB-GENE-490169 Length:1289 Species:Xenopus tropicalis


Alignment Length:997 Identity:219/997 - (21%)
Similarity:345/997 - (34%) Gaps:314/997 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 KWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETRLYDCSLCIRKFSRSEALEAHLKIHRNS 259
            |..||.|. |.||:|..:|.|.|.||.| ::.|. .::.:.|::|.|.||.:.:|::|::.||.:
 Frog   188 KLHTGDKK-YHCHECEAAFSRSDHLKIH-LKTHS-SSKPFKCTVCKRGFSSTSSLQSHMQAHRKN 249

  Fly   260 KRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRH-LEEHPDIVSLCGRPNMEP 323
            |.....|:.:..|...:            |..|:..:::..||.:| :..||   .|..:.:::.
 Frog   250 KEYMTKSDREMKKDDFM------------CDYCEETFSQTEDLEKHVMTRHP---QLSEKADLQC 299

  Fly   324 HELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFYSI---------------TNQS-------G 366
            ....|:|..::..|:....::..:|.......::|.|:               :|.|       |
 Frog   300 IHCPEVFADETSLLTHIDHVHANKKHKCPMCPEQFSSVEEVYCHLDSHRQPDSSNHSISPDPVLG 364

  Fly   367 YEMDLDSSETDSDLDGDHDDQ----------HKR-----RKKSR---KATYSCELCQQK-FPRKY 412
            ....:.|:..||....:....          |||     |:..|   |.||||..|.:: |....
 Frog   365 SVASMSSATPDSSASLERASTPDSTLKPIRGHKRTGSFDREDERNWPKITYSCPYCSKRDFNSLA 429

  Fly   413 QLYDHQRQSHSWSDAP---HVCGRCDGRFVSLQLLRHHNESQCRNAQKR-------------FLC 461
            .|..|.:..|  .|.|   |.|..|.....:|..|..|    .|...|.             |.|
 Frog   430 VLEIHLKTIH--VDKPQQNHTCQICLDSLPTLYNLNEH----VRKVHKNHAYPMVQFSNITAFHC 488

  Fly   462 HKCPLRFRWKHNLKTHFREHRIT-----------NQTFECSECKRVFDKKKSLTVHLLSVHAE-- 513
            :.||..|...::|:.|.   |:|           |..|.|::|...|..:.|||.|:...|..  
 Frog   489 NYCPEMFADINSLQEHI---RVTHCGPNATTQEGNNAFFCNQCSMGFLTESSLTEHIQQTHCNVG 550

  Fly   514 ----ESKLI----------PCQWCSRK--FYRHDYLVKHLKRHGLKEHDIPLA--------ETLI 554
                ||.:|          .|.:|:..  |.....|.||:|.:   ..:||||        ::.:
 Frog   551 SSKLESPVIQPTQSFMEVYSCPYCTNSPIFGSILKLTKHIKEN---HKNIPLANHKKSKSEQSPV 612

  Fly   555 AATSRPNGAKR--------------ITCRMCNLHFERIVDLRAHIQLELKLSL------SLHQSY 599
            ::....:..||              ..|..|:|.|......:.|::..|:|.|      ...:.:
 Frog   613 SSDVEVSSPKRQRLCVNLNSVSNGEYPCNQCDLKFSNFETFQTHLKSHLELLLRKQSCPQCKEDF 677

  Fly   600 DSPHN-------YSITNESGFELQLEDSE--TEDEMQP---GVGSRPVYICELCSVQCKRKFEMI 652
            ||..:       :.:|..:.:..:..|.:  :.|::|.   .:.:..:|.|.||......|..:.
 Frog   678 DSQESLLQHLTIHYMTTSTHYVCESCDKQFSSVDDLQKHLLDMHTFVLYHCTLCQEVFDSKVSIQ 742

  Fly   653 QHQRTMHRFDKMPHECDDCIF------------------------KCVSKSIMDHHRQGQCSSTE 693
            .|....|..:|..:.|..|.:                        ||:.        .|:..|||
 Frog   743 VHLAVKHSNEKKMYRCTACNWDFRREVDLQLHVKHSHLGNPAKSHKCIF--------CGETFSTE 799

  Fly   694 -----------KKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTG-----------DRHTQGT 736
                       ||:.|..||..|.....||:|:..:|.....:|..|           ....:..
 Frog   800 VELQCHITTHSKKYNCKFCSKAFHAIILLEKHLREKHCVFDTNNQNGTANGMVPANKKSESAEAQ 864

  Fly   737 GDLEK--------DATEDGI----PLLQCPHCDRTYQMKSRLNNH-IRDVHI-----NGDRKRKE 783
            ..|.|        :|:||.:    |:..|..|...|.|:..|.|| :||.:|     :..||:.|
 Frog   865 SVLMKNPDVTNSHEASEDDVDASEPMYGCDICGAAYTMEVLLQNHRLRDHNIRPGEDDSSRKKAE 929

  Fly   784 AIK-RFLCSLCGMETRSAAALVTHMRRHTG-EKPFKCDLCEMAFP----------RHS------- 829
            .|| ...|::|.....|...|..||:.|.| .|.:.|.:|...||          .||       
 Frog   930 FIKGTHKCNICSRTFFSENGLREHMQTHRGPAKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGT 994

  Fly   830 ------------ELASHRRMH-------TGEKPFHCTVCGKDFARSDKLKRHMLTH--------- 866
                        |...|.:||       ||   |.|.||.:....:.:||.|...|         
 Frog   995 CRICKMPLQSEEEFIEHCQMHPDLRNSLTG---FRCVVCMQTVTSTLELKIHGTFHMQKLAGNSA 1056

  Fly   867 ----SG---LKPHKCTYCEKSYRQAKDL-KLH------------LQQHTGECP------------ 899
                :|   .|.:||..|.|.:|..:|| ||.            |.:.|...|            
 Frog  1057 ASSPNGQTLQKMYKCALCLKEFRNKQDLVKLDVNGLPYGLCAGCLSRSTNGQPSNPTPQEACDRL 1121

  Fly   900 ---FVCGTCGERFIQSSTLEKH 918
               ..|..|..:|..:..||.|
 Frog  1122 CTSLRCPECSVKFESAEDLESH 1143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 9/20 (45%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..422 CDD:275368 5/21 (24%)
C2H2 Zn finger 431..447 CDD:275368 4/15 (27%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 7/20 (35%)
C2H2 Zn finger 520..540 CDD:275368 7/21 (33%)
C2H2 Zn finger 638..659 CDD:275368 5/20 (25%)
C2H2 Zn finger 668..690 CDD:275368 5/45 (11%)
C2H2 Zn finger 698..715 CDD:275368 6/16 (38%)
C2H2 Zn finger 753..774 CDD:275368 9/21 (43%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 28/123 (23%)
C2H2 Zn finger 818..838 CDD:275368 8/48 (17%)
C2H2 Zn finger 846..866 CDD:275368 6/19 (32%)
C2H2 Zn finger 874..894 CDD:275368 9/32 (28%)
C2H2 Zn finger 902..924 CDD:275368 6/17 (35%)
znf423XP_002937417.2 COG5048 <141..246 CDD:227381 22/60 (37%)
C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..190 CDD:275368 1/1 (100%)
COG5048 196..601 CDD:227381 100/433 (23%)
C2H2 Zn finger 198..218 CDD:275368 9/20 (45%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
C2H2 Zn finger 267..286 CDD:275368 5/18 (28%)
C2H2 Zn finger 299..316 CDD:275368 3/16 (19%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 449..470 CDD:275368 6/24 (25%)
C2H2 Zn finger 488..509 CDD:275368 7/23 (30%)
C2H2 Zn finger 525..546 CDD:275368 7/20 (35%)
C2H2 Zn finger 640..660 CDD:275368 5/19 (26%)
C2H2 Zn finger 670..690 CDD:275368 2/19 (11%)
C2H2 Zn finger 700..717 CDD:275368 3/16 (19%)
C2H2 Zn finger 728..749 CDD:275368 5/20 (25%)
C2H2 Zn finger 758..779 CDD:275368 2/20 (10%)
C2H2 Zn finger 789..809 CDD:275368 5/27 (19%)
C2H2 Zn finger 815..833 CDD:275368 7/17 (41%)
C2H2 Zn finger 893..914 CDD:275368 8/20 (40%)
C2H2 Zn finger 937..957 CDD:275368 6/19 (32%)
C2H2 Zn finger 966..986 CDD:275368 4/19 (21%)
C2H2 Zn finger 1205..1225 CDD:275368
C2H2 Zn finger 1236..1257 CDD:275368
C2H2 Zn finger 1266..1282 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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