DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Zfp648

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001385685.1 Gene:Zfp648 / 100362915 RGDID:2323778 Length:534 Species:Rattus norvegicus


Alignment Length:432 Identity:115/432 - (26%)
Similarity:165/432 - (38%) Gaps:136/432 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 CSECKRVFDKKKSLTVHLLSVHAEESKLIP--CQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAET 552
            |.:.:|.|.|...     |.|.||:..:.|  ||.|.:.:.....|.:|.:.|            
  Rat   221 CVQGRRAFQKSSE-----LQVSAEQRGIKPYVCQLCGKAYSHRSTLQQHRRLH------------ 268

  Fly   553 LIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQL 617
                    .|.:...|..|:..:....|.|.||:..                             
  Rat   269 --------TGERPYRCPFCDKAYTWSSDHRKHIRTH----------------------------- 296

  Fly   618 EDSETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMD 682
                        .|.:| |.|..|.....|..::.:|||.||                       
  Rat   297 ------------TGEKP-YGCPDCGRAFVRSSDLRKHQRNMH----------------------- 325

  Fly   683 HHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDG 747
                    |.:|...|.:|...|..|.:     ||:|.:                      |..|
  Rat   326 --------SNDKPFPCAQCGLTFNRPLS-----LLRHQR----------------------THLG 355

  Fly   748 IPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTG 812
            ....:|..|.|.:.:.||:..|.| || :|:|.       |.||:||.....::.|..|...|||
  Rat   356 AKPFRCSCCSREFSVASRMVEHQR-VH-SGERP-------FPCSICGKCFTKSSNLHEHQTLHTG 411

  Fly   813 EKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYC 877
            ::||||..|.:.|.:.|.|..|:|:||||:||.|..||:.||||..||||..||||.|...|..|
  Rat   412 QRPFKCADCGVTFAQPSRLLRHQRIHTGERPFPCAECGQAFARSSTLKRHQQTHSGDKDFLCAEC 476

  Fly   878 EKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHR 919
            .:::|.|.:|..|::.|.||.|:.|..||:.|.:||.|::|:
  Rat   477 GRAFRIASELAQHIRMHNGERPYQCEGCGQTFTRSSHLQRHQ 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368 5/20 (25%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 638..659 CDD:275368 6/20 (30%)
C2H2 Zn finger 668..690 CDD:275368 0/21 (0%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 36/71 (51%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
C2H2 Zn finger 846..866 CDD:275368 11/19 (58%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 8/18 (44%)
Zfp648NP_001385685.1 SFP1 <193..292 CDD:227516 20/95 (21%)
C2H2 Zn finger 221..240 CDD:275368 7/23 (30%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
COG5048 272..>518 CDD:227381 98/354 (28%)
C2H2 Zn finger 276..296 CDD:275368 6/19 (32%)
C2H2 Zn finger 304..322 CDD:275368 4/17 (24%)
C2H2 Zn finger 333..353 CDD:275368 7/46 (15%)
C2H2 Zn finger 361..381 CDD:275368 7/20 (35%)
C2H2 Zn finger 389..409 CDD:275368 6/19 (32%)
C2H2 Zn finger 417..437 CDD:275368 7/19 (37%)
C2H2 Zn finger 445..465 CDD:275368 11/19 (58%)
C2H2 Zn finger 473..493 CDD:275368 6/19 (32%)
C2H2 Zn finger 501..521 CDD:275368 8/18 (44%)
Blue background indicates that the domain is not in the aligned region.

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