DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and Zfp945

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_006228161.2 Gene:Zfp945 / 100362641 RGDID:2324317 Length:901 Species:Rattus norvegicus


Alignment Length:899 Identity:215/899 - (23%)
Similarity:336/899 - (37%) Gaps:239/899 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 NELLMKHLKNGAAPTSTDCLQEAPMELCAEQHVEVKLET-EDEDCG----ENDVTITCSELPEPD 138
            |.:.:||.:          :.:...:..|.:||.::.:: :..:||    |:..:..|.  ...:
  Rat   174 NRVCIKHHE----------VLDRETKYSASEHVNIEEKSNKSNECGRMIEESSKSTPCQ--TNDE 226

  Fly   139 ETDMES---------------KKSVDPLTMI------ETVKLEMEPRSVEKPAYDDPTSDFEDED 182
            :|.:||               |..|:.|.:.      :||.:.|  |...|..|        |:.
  Rat   227 DTSIESSNRHKTENAREPCKYKDCVNSLNLCSITSQNQTVHIGM--REHNKAQY--------DKV 281

  Fly   183 SLDNLPLYNRIQKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETRLYDCSLCIRKFSRSE 247
            .|.|   |..:||...|....:||....:.||....|.||: |.|..| :.|.|:.|.:.|....
  Rat   282 FLSN---YKIVQKGINGGMKSHKCRKSGKFFKVHSSLSRHQ-RAHSRE-KHYKCTKCSKSFLHLS 341

  Fly   248 ALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRR----HLEE 308
            .|:.|.|||...                      :.||..||..|   :..::|..|    |:||
  Rat   342 HLKLHYKIHYGG----------------------YPYKCTECGKC---FYHVSDFERHNRIHVEE 381

  Fly   309 HPDIVSLCG---------RPNMEPHELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFY----- 359
            :....|.||         |.:.:.|| .|:....::|.......:........||.::.:     
  Rat   382 NTYKCSFCGKSFICCSEFRKHQKIHE-GEMLSECNQDARSICTFSCREYHYRDGIREKCFRCKEC 445

  Fly   360 --SITNQSGYEM--------------DLDSSETDSDLDGDHDDQHKRRKKSRKATYSCELCQQKF 408
              :::..||.::              :.|.|.|.......|...|     :.:.|:.|..|.:.|
  Rat   446 GKTLSTSSGLKIHHRIHTGEKPYKCTECDKSFTQKSNLRMHQKIH-----TGENTFKCSDCNKCF 505

  Fly   409 PRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHN 473
            .:|..|..||| :|| .:.|:.|..||..|.....||.|  .:..:.:|.:.|.:|...|..|.:
  Rat   506 TQKCLLRIHQR-THS-GEKPYKCNECDKAFAGSSYLRSH--QRIHSGKKPYKCSECDKSFNRKDH 566

  Fly   474 LKTHFREHRITNQTFECSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLK 538
            |:.|.|.| ...:.::||||.:.|.:|.|:.:| ..:|..| |...|..|.:.|.:.|.||.|..
  Rat   567 LRIHQRVH-TGEKPYKCSECDKCFTQKGSVRIH-QRIHTGE-KPYKCSKCDKSFTKKDGLVIHQI 628

  Fly   539 RHGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPH 603
            .|                    .|.:...|..|:..|.|...||.|.:..               
  Rat   629 IH--------------------TGEEPYKCSECDKSFNRKDHLRTHQRFH--------------- 658

  Fly   604 NYSITNESGFELQLEDSETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHEC 668
                                      .|.| :|.|..|.....:|..:..||: :|..|| .::|
  Rat   659 --------------------------TGER-IYKCSECDEYFTQKSSLRIHQK-IHTGDK-TYKC 694

  Fly   669 DDCIFKCVSKSIMDHHRQGQCSSTEKKHA------CGKCSYKFMWPENLEQHILLQHSKSSVSNP 727
            ..|     .||.   :|:....:.|:.||      |.:....|....:|..|..| ||:..|   
  Rat   695 SVC-----GKSF---NRRNHLRTHERIHAGEKPYDCTEFENSFTHNGSLRIHHRL-HSRKKV--- 747

  Fly   728 TGDRHTQGTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSL 792
                                   .:|..||:::...|.:..|.| :| :|:       |.:.||.
  Rat   748 -----------------------YKCSECDKSFTSSSYVRIHQR-IH-SGE-------KPYKCSE 780

  Fly   793 CGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSD 857
            |.....|.:.|..|.|.|||:||:||..|:..|.:...|..|:|.||||||:.|..|.:.|....
  Rat   781 CNKCFTSGSYLRMHQRIHTGDKPYKCGECDKCFTQKCSLRIHQRSHTGEKPYKCGNCERSFTSGS 845

  Fly   858 KLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQ 911
            .|:.|...|.|.||:||:.|:||:.|...|::|.:.|.||.|:....|.:.|.|
  Rat   846 YLRIHQRIHKGEKPYKCSECDKSFTQKGYLRIHQRIHKGEKPYKGNKCEKSFTQ 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 7/20 (35%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
C2H2 Zn finger 401..422 CDD:275368 8/20 (40%)
C2H2 Zn finger 431..447 CDD:275368 6/15 (40%)
C2H2 Zn finger 461..481 CDD:275368 7/19 (37%)
C2H2 Zn finger 490..511 CDD:275368 8/20 (40%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 638..659 CDD:275368 5/20 (25%)
C2H2 Zn finger 668..690 CDD:275368 5/21 (24%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 7/19 (37%)
COG5048 814..>886 CDD:227381 30/71 (42%)
C2H2 Zn finger 818..838 CDD:275368 6/19 (32%)
C2H2 Zn finger 846..866 CDD:275368 5/19 (26%)
C2H2 Zn finger 874..894 CDD:275368 7/19 (37%)
C2H2 Zn finger 902..924 CDD:275368 3/10 (30%)
Zfp945XP_006228161.2 KRAB 131..171 CDD:460171
C2H2 Zn finger 302..322 CDD:275368 7/20 (35%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 5/22 (23%)
C2H2 Zn finger 386..406 CDD:275368 4/19 (21%)
C2H2 Zn finger 442..462 CDD:275368 2/19 (11%)
zf-H2C2_2 455..479 CDD:463886 2/23 (9%)
C2H2 Zn finger 470..490 CDD:275368 4/19 (21%)
C2H2 Zn finger 498..518 CDD:275368 8/20 (40%)
COG5048 522..872 CDD:227381 119/462 (26%)
C2H2 Zn finger 526..546 CDD:275368 7/21 (33%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
C2H2 Zn finger 582..602 CDD:275368 8/20 (40%)
C2H2 Zn finger 610..630 CDD:275368 7/19 (37%)
C2H2 Zn finger 638..658 CDD:275368 7/19 (37%)
C2H2 Zn finger 666..686 CDD:275368 5/20 (25%)
C2H2 Zn finger 694..714 CDD:275368 6/27 (22%)
C2H2 Zn finger 722..742 CDD:275368 5/20 (25%)
C2H2 Zn finger 750..770 CDD:275368 6/20 (30%)
C2H2 Zn finger 778..798 CDD:275368 7/19 (37%)
C2H2 Zn finger 806..826 CDD:275368 6/19 (32%)
C2H2 Zn finger 834..854 CDD:275368 5/19 (26%)
C2H2 Zn finger 862..882 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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