DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18476 and Zfp267

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001395762.1 Gene:Zfp267 / 100359945 RGDID:2323100 Length:796 Species:Rattus norvegicus


Alignment Length:965 Identity:224/965 - (23%)
Similarity:339/965 - (35%) Gaps:272/965 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ELT--EINLDATGSQKFPQCLCSGCTKKLMGAYCYVKQAMAANELLMKHLKN----GAA---PTS 94
            :||  ::.:|.:|.:.  :||.|             :|.....::::::.:|    |.|   |..
  Rat     3 QLTFRDVAIDFSGEEW--ECLNS-------------EQQNLYTDVMLENYRNLVFLGLAVSKPYL 52

  Fly    95 TDCLQ----------EAPMEL------------CAEQHVEVKLET----EDEDCG---------- 123
            ..||:          :.|:.|            ..||::....:.    ...|||          
  Rat    53 VTCLEQRKEPWSVKRQKPVALFPALFPHHNRDFSPEQNINYSFQELIHGPRGDCGFDSLYFPEER 117

  Fly   124 ----ENDVTITCSELPEPDETDMESKKSVDPL-----------TMIETVKLEMEPRSVEKPAYDD 173
                :.|:..||....:|..| .::.||..|.           :.:..|..|....||.|.....
  Rat   118 ELVEDGDILGTCYNRHDPFLT-ADNSKSFTPRRDQEQEMAHKNSQVRQVTSEEPCGSVSKHQNQS 181

  Fly   174 --PTSDFEDEDSLDNLPLYNRIQKWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETRLYDC 236
              |||.|:     |||           |.......|.....|..|                  .|
  Rat   182 LKPTSYFK-----DNL-----------GTPQRGLLHSSANDFNNF------------------KC 212

  Fly   237 SLCIRKFSRSEALEAHLKIH-RNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIA 300
            |..: .|..:..::..||.. :|||                               |....|.| 
  Rat   213 SFGL-SFHSNIFVDGELKNKGKNSK-------------------------------CNQFENSI- 244

  Fly   301 DLRRHLEEHPDIVSLCGRPNMEPHELAELFYP------DSKDLSEEQLINLIRKDLAAGIYQRFY 359
             :...|..:..|...|.:....|.......:|      .|.|:.|   |..|.|:...|..:. .
  Rat   245 -MENSLVYNQQIGLSCAKAQNSPKYGRFFTHPISPSQNSSTDILE---IQYICKENRKGFAEE-S 304

  Fly   360 SITNQSGY---EMDLDSSETDSDL-----DGDHDDQHKRRKKSRKATYSCELCQQKFPRKYQLYD 416
            :::|:.|.   |.....:|.:|||     ..:|...|         .|.|..|...|.:..:|..
  Rat   305 TLSNRQGMYIAETVYQGNENNSDLALESYPANHQSAH---------LYKCYKCDTAFHQYSELII 360

  Fly   417 H-----QRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRN--AQKRFLCHKCPLRFRWKHNL 474
            |     |.|.....|       |...|       |.:.|..::  .:|.:.|.:|...|.:..:|
  Rat   361 HQYIHIQDQISKGMD-------CSTAF-------HQSSSLTKSHAGEKPYKCKECGKAFTYCSSL 411

  Fly   475 KTHFREHRITNQTFECSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKR 539
            :.|.|.|....| .:|.:|.:.|..|..||.| .|:||.: |...|::|.:.|.:...:.:|.:.
  Rat   412 RQHHRIHSGVKQ-HKCKDCGKAFYHKSLLTQH-QSIHAGK-KPYCCKFCGKAFNQRSTVTQHQRI 473

  Fly   540 HGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHN 604
            |                    .|.:...|:.|...|.:            :.||||||...:...
  Rat   474 H--------------------TGERPYHCKDCGKAFHQ------------RSSLSLHQRVHTGEK 506

  Fly   605 YSITNESGFELQLEDSETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECD 669
            .....|.|.........|:.: :...|.|| |.|:.|.....:|..:.|||| :|..:| |:.|.
  Rat   507 PYKCKECGKAFNRNSLLTQHQ-RIHTGERP-YHCKDCGKTFNKKSSLTQHQR-IHTGEK-PYSCK 567

  Fly   670 DCIFKCVSKSIMDHHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQ 734
            ||......:|.:..|::|.  :.||.:.|.:|...|.     ....|.||.|.         || 
  Rat   568 DCGKAFNQRSSLSLHQRGH--TGEKPNKCNECGKAFN-----RVFFLTQHQKI---------HT- 615

  Fly   735 GTGDLEKDATEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRS 799
                        |.....|..|.:.::.:|.|..|.| || .||       |.:.|..||.....
  Rat   616 ------------GEKAYHCKDCGKAFKQRSSLTQHQR-VH-TGD-------KPYHCKHCGKAFTQ 659

  Fly   800 AAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHML 864
            .::...|.|.||||||:||..|:.||.|:..|..|:|:||||||:||..||:.|.:...|.:|..
  Rat   660 RSSFTRHQRIHTGEKPYKCQDCDKAFSRNLLLIQHQRIHTGEKPYHCQDCGRAFNQRSSLTQHQR 724

  Fly   865 THSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHR 919
            .|:|.||..|..|.|::.|......|.:.||||..:.|..|...|..||.|.:|:
  Rat   725 VHTGDKPFCCKDCGKAFTQRSSFNRHQRVHTGEKQYKCKECDRAFKCSSHLAEHQ 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 3/20 (15%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
C2H2 Zn finger 401..422 CDD:275368 7/25 (28%)
C2H2 Zn finger 431..447 CDD:275368 2/15 (13%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..511 CDD:275368 8/20 (40%)
C2H2 Zn finger 520..540 CDD:275368 4/19 (21%)
C2H2 Zn finger 638..659 CDD:275368 7/20 (35%)
C2H2 Zn finger 668..690 CDD:275368 6/21 (29%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 6/20 (30%)
C2H2 Zn finger 790..810 CDD:275368 5/19 (26%)
COG5048 814..>886 CDD:227381 32/71 (45%)
C2H2 Zn finger 818..838 CDD:275368 8/19 (42%)
C2H2 Zn finger 846..866 CDD:275368 6/19 (32%)
C2H2 Zn finger 874..894 CDD:275368 5/19 (26%)
C2H2 Zn finger 902..924 CDD:275368 7/18 (39%)
Zfp267NP_001395762.1 KRAB 4..64 CDD:214630 14/74 (19%)
C2H2 Zn finger 345..364 CDD:275368 5/18 (28%)
C2H2 Zn finger 375..390 CDD:275368 5/28 (18%)
C2H2 Zn finger 398..418 CDD:275368 6/19 (32%)
zf-H2C2_2 410..435 CDD:463886 8/25 (32%)
C2H2 Zn finger 426..446 CDD:275368 8/20 (40%)
C2H2 Zn finger 454..474 CDD:275368 4/19 (21%)
COG5048 <479..633 CDD:227381 46/198 (23%)
C2H2 Zn finger 482..502 CDD:275368 9/31 (29%)
C2H2 Zn finger 510..530 CDD:275368 3/20 (15%)
C2H2 Zn finger 538..558 CDD:275368 7/20 (35%)
C2H2 Zn finger 566..586 CDD:275368 5/19 (26%)
C2H2 Zn finger 594..614 CDD:275368 7/33 (21%)
C2H2 Zn finger 622..642 CDD:275368 6/20 (30%)
zf-H2C2_2 634..659 CDD:463886 11/33 (33%)
C2H2 Zn finger 650..670 CDD:275368 5/19 (26%)
zf-H2C2_2 665..687 CDD:463886 13/21 (62%)
C2H2 Zn finger 678..698 CDD:275368 8/19 (42%)
zf-H2C2_2 691..715 CDD:463886 14/23 (61%)
C2H2 Zn finger 706..726 CDD:275368 6/19 (32%)
zf-H2C2_2 718..743 CDD:463886 9/24 (38%)
C2H2 Zn finger 734..754 CDD:275368 5/19 (26%)
zf-H2C2_2 746..771 CDD:463886 8/24 (33%)
C2H2 Zn finger 762..779 CDD:275368 6/16 (38%)

Return to query results.
Submit another query.