DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18476 and znf665

DIOPT Version :10

Sequence 1:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001165008.1 Gene:znf665 / 100328608 XenbaseID:XB-GENE-6050027 Length:403 Species:Xenopus tropicalis


Alignment Length:498 Identity:149/498 - (29%)
Similarity:198/498 - (39%) Gaps:113/498 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 SDAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFE 489
            |.|||.|..|..||.....|..|  .:....:|.|:|.||...||.||.|..|...| ...:.|.
 Frog    12 SVAPHECPECGKRFSGRNKLTIH--YRVHTGEKPFMCTKCGKSFREKHRLTEHQLIH-TGEKPFM 73

  Fly   490 CSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLI 554
            |:||.:.|.||:|||.|.| :|..| |...|..|.:.|.:...|..|...|              
 Frog    74 CTECGKSFRKKQSLTAHQL-IHTGE-KPFMCTECGKSFRQKHQLTAHQLIH-------------- 122

  Fly   555 AATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLED 619
                  .|.|...|..|...|.:...|.|| ||       :|                       
 Frog   123 ------TGEKPFMCTECGKSFRQKHRLTAH-QL-------IH----------------------- 150

  Fly   620 SETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDC---IFKCVSKSIM 681
                      :|.:| ::|..|....::|..:.||| .:|..:| |:.|.:|   ..|  .:|::
 Frog   151 ----------MGEKP-FMCTECGKSFRQKQLLTQHQ-LIHTGEK-PYACTECDKQFHK--RRSLL 200

  Fly   682 DHHRQGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATED 746
            .|.|   ..:..|...|.:|...|......::|..:              ||             
 Frog   201 SHQR---IHTGVKPFVCMECGKSFSNKTYFQRHQRI--------------HT------------- 235

  Fly   747 GIPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHT 811
            |..|..|..|.:....||:|.||.: || .|:       |.|.|:.||....:...|.:|.:.||
 Frog   236 GEKLFSCTECGKCLITKSQLGNHYK-VH-TGE-------KPFSCTECGKRFTTKTKLGSHYKVHT 291

  Fly   812 GEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTY 876
            |||||.|..|..:|...|:|.||..:|||||||.||.|.|.|....:|..|...|:|.||..||.
 Frog   292 GEKPFFCTECGKSFTTKSQLNSHYTVHTGEKPFSCTECCKSFTTKSQLNSHYTVHTGEKPFSCTE 356

  Fly   877 CEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHR 919
            |.||:.....|..|...||||.||.|..||:.|:.:..|.||:
 Frog   357 CGKSFTTKAKLNSHYTVHTGEKPFSCTECGKSFVSNGNLTKHQ 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368 5/15 (33%)
C2H2 Zn finger 461..481 CDD:275368 9/19 (47%)
C2H2 Zn finger 490..511 CDD:275368 11/20 (55%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 638..659 CDD:275368 6/20 (30%)
C2H2 Zn finger 668..690 CDD:275368 6/24 (25%)
C2H2 Zn finger 698..715 CDD:275368 3/16 (19%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 5/19 (26%)
COG5048 814..>886 CDD:227381 33/71 (46%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
C2H2 Zn finger 846..866 CDD:275368 7/19 (37%)
C2H2 Zn finger 874..894 CDD:275368 7/19 (37%)
C2H2 Zn finger 902..924 CDD:275368 7/18 (39%)
znf665NP_001165008.1 COG5048 15..392 CDD:227381 144/486 (30%)
C2H2 Zn finger 18..38 CDD:275368 6/21 (29%)
C2H2 Zn finger 46..66 CDD:275368 9/19 (47%)
C2H2 Zn finger 74..94 CDD:275368 11/20 (55%)
C2H2 Zn finger 102..122 CDD:275368 5/19 (26%)
C2H2 Zn finger 130..150 CDD:275368 8/27 (30%)
C2H2 Zn finger 158..178 CDD:275368 6/20 (30%)
C2H2 Zn finger 186..206 CDD:275368 6/24 (25%)
C2H2 Zn finger 214..234 CDD:275368 4/33 (12%)
C2H2 Zn finger 242..262 CDD:275368 7/20 (35%)
C2H2 Zn finger 270..290 CDD:275368 5/19 (26%)
C2H2 Zn finger 298..318 CDD:275368 7/19 (37%)
C2H2 Zn finger 326..346 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
C2H2 Zn finger 382..402 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

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