DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42327 and ptpn22

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_001092890.1 Gene:ptpn22 / 565606 ZFINID:ZDB-GENE-060503-458 Length:887 Species:Danio rerio


Alignment Length:339 Identity:104/339 - (30%)
Similarity:144/339 - (42%) Gaps:83/339 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1105 VERRSDVFEEFRDVPQIIA-RADEVPPGCEDKNRYANVIPLPETRVVLQRQGDDDKTEYINANYV 1168
            ::|:|..:...|..|...| :.|.|     .||||.:::|...:||.|......:.|:||||:::
Zfish    36 LKRQSTKYRAERTYPTTAADKQDNV-----KKNRYKDIVPFDHSRVKLSLFTSKNDTDYINASFI 95

  Fly  1169 RGPRDAPNYYIACQAPLESTTSDFWRMIWEQQSRVIIQATDLSENGIERCAEYLPPSATLDNHSS 1233
            :|. .....|||.|.||.:|..||||||||...:||:......|.|.::|..|.|        .|
Zfish    96 KGV-SGSKAYIATQGPLSNTVLDFWRMIWEYNIQVIVMVCREFEMGRKKCERYWP--------ES 151

  Fly  1234 YGDYQV----TLKHREVKDRYAISTLVLKRVDGEESRELTHYWY-KWPEAGVPAEEAPIIAMLLE 1293
            .||..|    |:.:...:::....|..||....:|||.|....| .||:.|||.....|:.:|.|
Zfish   152 KGDVFVCEAFTILYESDENKGDYLTRTLKVTFKQESRRLKQLHYVNWPDHGVPDSIPAILELLQE 216

  Fly  1294 ARSSLKSYSLEQANELREKSATLETSMDADGSKAEAGSTSSHEINGNISSRSGTRSQQGPLTVHC 1358
            .|       :.|.||                           ||               |:.:||
Zfish   217 MR-------IYQDNE---------------------------EI---------------PICIHC 232

  Fly  1359 SPGTGRTGTIIASDMAIRSLETPKRSVDIP------QLVYYVRRGRASAVQTKEQYEFIYKVASM 1417
            |.|.||||.:.|.|.....|   ||.: ||      :||..:|..|.|.||||||||.:|:...:
Zfish   233 SAGCGRTGALCAIDYTWNLL---KRQI-IPEDFSIFELVKGMRTQRPSVVQTKEQYELVYRTIKL 293

  Fly  1418 ----YAAKITNLSN 1427
                |.|.:...||
Zfish   294 LFERYLAALEAPSN 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 93/291 (32%)
Y_phosphatase 1134..1415 CDD:278528 93/291 (32%)
ptpn22NP_001092890.1 Y_phosphatase 59..291 CDD:278528 94/298 (32%)
PTPc 61..291 CDD:238006 93/291 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.