DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42327 and Ptp52F

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster


Alignment Length:1621 Identity:320/1621 - (19%)
Similarity:541/1621 - (33%) Gaps:512/1621 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WLRG--GLMLALAVMVTQARFIAKR-ETTGLEQAMA-----STSTDPDIVKAPRESGIGREPVAI 62
            |:.|  |..:...|.|::::.:|:: |.|.:.....     |...|..|.|....:|.|.|..|.
  Fly    21 WIAGVQGQTVGSLVAVSESQELAEKVEVTVVSTVYTLGFSISNEADYSIDKVICRNGSGSETEAN 85

  Fly    63 KAE-------SDMFSSQTNIEDEKSAK--TVDQT---ETQTASPKENLNVKQTTA-----AFEKN 110
            .|.       ...::|..:.....|.|  ..|||   .|:...||..:.....||     .::.|
  Fly    86 AAHVCENLNPCTFYTSVVSFRSNVSGKPPPSDQTIYAYTEYKQPKTTVTSVVATANTIKVTWQTN 150

  Fly   111 ESSNTTESHLNGAQVDPVK--ELKDTETSADTVKEESSTTTTSQLD-QNPTNV---TDKKSTEAQ 169
            :.:......:.....|..|  :|.:.::|...|...:..|.|..|| :|..:|   ||....:.|
  Fly   151 DRACVESFGITAKATDYTKSFQLLNDKSSQTFVNLSACLTHTITLDTRNNASVVVDTDATDVDTQ 215

  Fly   170 FKDE-RLSKEILSTTTEQILLT------EKALQKYVVITNSPLRGEAQPEIKDKTSKSATSEKST 227
            :.:. .|...:.:..:...::|      :..:..||              .|.:.:...|.:.  
  Fly   216 YAEPGDLVMNVTNLASGITMITWGDPSEKNCISNYV--------------FKWQRNDCGTDQN-- 264

  Fly   228 LPLKPVTIEVPSTTTEGVFNTTTTRSSDHGRSMQYSSTTEESSRSSPASVTPMKLIPLPMTSTPS 292
               :..|.:||||.|.              ..:.|.:||                   ||.:|| 
  Fly   265 ---QDTTTDVPSTETT--------------NEIDYVTTT-------------------PMETTP- 292

  Fly   293 STTSTSTPLPTTAVSFASNENVIEESTSKSEVRQ--LPEKRA-------KFISENSTNAQQLTLP 348
            .|.|.......|.||            |..::|:  |.:.:.       .||:||||        
  Fly   293 DTPSDEVKCEWTDVS------------SDGKLREYLLTDLQGCDLYTFQVFINENST-------- 337

  Fly   349 NTAEVWSLAGMKAVPKAPLTTTTSVPLLNHTDLANDIDMPLNKTELHKEKNLLDWMNIAMLPLTP 413
                          .||..|.|::..|::.....:....|   |:||     ..|       .:|
  Fly   338 --------------AKASQTFTSAEKLVSAVYEPSPTAYP---TQLH-----WTW-------FSP 373

  Fly   414 ENRTEFVVRTTLDAT---EGATQATTEALVEETHSKSDITVGLEQDNVTTARTMPSTPDPGSMDL 475
            :|..:.|...::..|   :.:...|...:.|||.:..|   .|:...:.....:|:       .|
  Fly   374 QNHPKCVANYSVTLTGPIQRSENKTMNVITEETFAIFD---DLDPCGIYLVEIVPN-------QL 428

  Fly   476 NMTTTTVRTQQLEV----PLVKKMSDAANAKLIEAVTEPQRETEAATEAATFVTLPEK----LAT 532
            |.:..|...:|..|    |.|              :.:|..|.||.:...::.| ||.    :..
  Fly   429 NGSAGTKYQEQSTVGEDQPSV--------------IQDPVVEAEAYSMEVSWKT-PEYADLCIDG 478

  Fly   533 FGITARVDS---TQTELLNVTTAAAATESGEMSKANST----------------------DTLSA 572
            :.::..::.   .:.|.|::||            .|:|                      :.|..
  Fly   479 YRLSGWMEDDKLVEVEALSITT------------QNTTVVFDKNLLACQVYIIQIIPYTKENLDG 531

  Fly   573 MTSTTTTTARPMSVEHVTPEQDMEAATS-----LATTAATSSGTTEAAATSSTTAATPVVSEAAT 632
            .........:...|::...:.:|:.|.|     :|..|..::......|..:..|.|.|.:..|.
  Fly   532 QLRQVGVETKAAIVDYTKVKLEMKNAGSEFIDLIAFNADYNNSCPTIFALFTCNATTQVRNPYAE 596

  Fly   633 AAEASATSEATTAATLSVATTAASTTEIAMKATQISNIRDDNDDNSNDVIV-----ATTKFPESE 692
            ......:.:...          ||.:.::..||.:..:...|....::.:|     .||.|||..
  Fly   597 RYVEGHSKQGFN----------ASLSPLSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQP 651

  Fly   693 QA-----ATTASV-----EPTTTSVSVR------VAGEVSTSIRPE--IIVTSTRNSTIVDTSTS 739
            ::     :|.:|:     .||.|:..::      :..|.|..:..:  |:...|::.|..|.|.:
  Fly   652 ESVMLEKSTVSSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVN 716

  Fly   740 ATSVATPTQTEIAQISNE------VNLEAVTVKTRDGLSDTNELRTAEKTDNAVNNSVAITESDL 798
            .|.:| |....:.|::.:      |..|.|...|...:||:....|. .|...|||:        
  Fly   717 FTGLA-PAVRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTV-LTQGPVNNN-------- 771

  Fly   799 GALATAVETNPTTT------------------NSLLSDVSKLSKEHESSLETNNIGEAPPESTTP 845
                ...|.|.|.|                  |...::.:.:|.|....|:|.|.......:.|.
  Fly   772 ----AVYEANVTITWKVPCKSNGDIEYFQLAFNGTRNNFAPVSFERRVELDTGNKQGRMSYTETE 832

  Fly   846 AAPA---TVAVATDE------STAAPAATGGQEIVREGQHHDGQQVADEQDTEQQLAKTTMAVTT 901
            ..|.   ||.|:...      |::.|.:         .|...|.......:..:|:         
  Fly   833 MQPQFDYTVEVSVKNRDVEQLSSSVPGS---------WQSPAGLPTIPSDELIKQM--------- 879

  Fly   902 TTTSATTTTTSTTTTTTETPLTTTTMQPVEISLLDDSTTTTTTTPAPPVYFESST---------- 956
             ..:...|:..|.|.....|....|....:|..:....:.......|.:.::.|:          
  Fly   880 -RANVEETSNPTKTAIVRLPADIMTSASGDIKWMALMISQKNCAGVPHLKYDVSSDWPKVLSYQE 943

  Fly   957 -----VASTTIRSSTT---MLPETT-----------------TASTQSPSEMPPTFMAPYPNELD 996
                 ....::...||   ..||..                 |......||:..|:.        
  Fly   944 AGADGTGDCSLEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQKTYC-------- 1000

  Fly   997 HMQTNAQDNG-----TDVNVII--------------------AITVSVIGV-VALILLVAFLYLM 1035
                    ||     ||.||::                    ||.|::|.| |...||:||    
  Fly  1001 --------NGPLLPDTDYNVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAF---- 1053

  Fly  1036 RKRQKQTSYGQRCRPVSLDAYSLDNVSVLGSVRRKGRDMRASKRTYGNAAFDDPSLRHNLLTASE 1100
                                       |||......|...|.||..|. ..:||   ...:.|..
  Fly  1054 ---------------------------VLGLTVLWVRKRLAWKRDSGQ-GIEDP---FGNVIAKN 1087

  Fly  1101 LARF---VERRSDVFEEFRDVP----QIIARADEVPPGCEDKNRYANVIPLPETRVVLQRQGDDD 1158
            .|.|   |.:...:..||:::.    ::...|.|:  ||. |||||::.|..:.||:|..  |.:
  Fly  1088 FAIFYTEVAKPEKLAREFKEITVVALELSYSASEL--GCH-KNRYADIFPYDKNRVILDI--DAE 1147

  Fly  1159 KTEYINANYVRGPRDAPNYYIACQAPLESTTSDFWRMIWEQQSRVIIQATDLSENGIERCAEYLP 1223
            .::||||:::.| ......|||.|.|...:..||||||.:...|||:|.|...|....:|.||.|
  Fly  1148 GSDYINASFIDG-HTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP 1211

  Fly  1224 PSATLDNHSSYGDYQVTLKHREVKDRYAISTL-VLKRVDGEESRELTHYWYKWPEAGVPAEEAPI 1287
            .:..        ...||:|.:||.:.|..:.| |:....|.:.:.:.:|:.|||:.|||.:...:
  Fly  1212 YNVR--------GLTVTIKSKEVLELYDRTELTVVHDKYGLKEKVIHYYFKKWPDHGVPEDPMHL 1268

  Fly  1288 IAMLLEARSSLK-SYSLEQANELREKSATLETSMDADGSKAEAGSTSSHEINGNISSRSGTRSQQ 1351
            |..:.:.::..: |||                                                 
  Fly  1269 IMFVKKVKAEKRPSYS------------------------------------------------- 1284

  Fly  1352 GPLTVHCSPGTGRTGTIIASDMAIRSLETPKRSVDIPQLVYYVRRGRASAVQTKEQYEFIY 1412
             |:.||||.|.|||||.|..|:.::.|::..: ::|.:.|..:|..|...|||::||.|:|
  Fly  1285 -PIVVHCSAGVGRTGTFIGLDLIMQRLKSESK-INIFETVKKLRFQRMKMVQTQQQYTFLY 1343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 81/281 (29%)
Y_phosphatase 1134..1415 CDD:278528 81/281 (29%)
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 21/101 (21%)
PTPc 1100..1345 CDD:214550 87/309 (28%)
PTPc 1125..1348 CDD:238006 81/282 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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